Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq168 111 2e-19
seq4 91.5 1e-13
>seq168
Length=66023
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| ||||| | | | |||||||| ||||||||||| || |
Sbjct 53830 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGAC 53771
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| | || ||||| | | |||| || ||||| |||||||||||
Sbjct 53770 AGGGTGCGGCCATCCTCCAACTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 53711
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| ||| | || | || | | || | ||| || | || |||||
Sbjct 53710 ATACCCTCCTTGTC-CTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCAC 53652
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | ||| | ||| || || || ||||| || ||||||||||||||
Sbjct 53651 CTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 53604
Score = 102 bits (112), Expect = 8e-17
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| | ||| || |||||| || || || || |
Sbjct 53569 GACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCG 53510
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||||||||| || || || ||||| ||| || || | |
Sbjct 53509 AAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACA 53450
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||| ||||| | || | || || ||||| || || ||
Sbjct 53449 TTG-TCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTAAGGGTCTT 53391
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 53390 GACGAAGATCTGCAT 53376
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/207 (70%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || || || | | | |||||||| || ||||||||||||
Sbjct 53374 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 53315
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| ||||| || |||| |||| ||||| || |||||||| ||
Sbjct 53314 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 53255
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| || | || | |||| ||| || | ||| || | |||||| |
Sbjct 53254 ATTCCCTCCTTGTC-TTGGATCTTGCTCTTAACGTTG-TCGATGGTATCAGACGACTCGA 53197
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592
|||| | || | || || |||||||
Sbjct 53196 CCTCAAGGGTGATGGTCTTGCCAGTCA 53170
>seq4
Length=289853
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | || || ||||||||| || || ||||
Sbjct 37197 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 37256
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 37257 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 37316
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | || |||| |||||||||||| | || | || || || ||||| || ||
Sbjct 37317 TTG-TCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 37375
Query 138600 TACAAAAATCTGCATGGCT 138618
|| || || |||||| ||
Sbjct 37376 CACGAAGATTTGCATGACT 37394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496257089992320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |