Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq168 104 2e-17 >seq168 Length=66023 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||||| ||| || ||||| ||||| || ||||| Sbjct 54061 ATACCACCACGGAGGCGGAGAACAAGATGCAACGTAGACTCCTTCTGGATGTTGTAATCA 54002 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | |||| || ||||||||||| Sbjct 54001 GACAGGGTACGGCCATCTTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 53942 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || |||||||| || || |||| || | || | ||| || || || || Sbjct 53941 GGGATGCCCTCCTTATCTTGGATCTTGGACTTGA-CGTTATCGATGGTATCCGACGATTC 53883 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || |||| || || ||||| || || || || ||||||||||| Sbjct 53882 GACTTCCAGCGTAATTGTCTTTCCGGTAAGGGTCTTGACGAAAATTTGCAT 53832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 |||||| || || ||||| || || || ||||| | ||| ||| ||||| || Sbjct 53807 ATGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCATCCTCCAACTG 53748 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || || | |||| || ||||||||||| ||||| || || || || ||||| || Sbjct 53747 CTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 53688 Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 |||| || | || | ||| || || || || || || || |||| ||| ||||| | Sbjct 53687 CGACTTGA-CGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTGCCCG 53629 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || |||||||| ||||| Sbjct 53628 TAAGAGTCTTGACAAAAATCTGCAT 53604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451998363565760