Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4 149 7e-31 seq168 143 3e-29 seq41 116 4e-21 >seq4 Length=289853 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 37199 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 37258 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 37259 GATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 37318 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||| ||| ||||| || | ||||| || ||||||||||| || || || Sbjct 37319 GTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 37378 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 37379 GAAGATTTGCAT 37390 >seq168 Length=66023 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| |||||||| |||| || ||||||||||| ||||| Sbjct 53567 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 53508 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| ||||||| ||| | | Sbjct 53507 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 53448 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || |||| |||||||| ||||| || || || || || Sbjct 53447 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTAAGGGTCTTGAC 53388 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 53387 GAAGATCTGCAT 53376 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| ||| |||||| ||||| ||||| || || || || || | || || Sbjct 54040 ACAAGATGCAACGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCTTCA 53981 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| |||| |||||||||||| | || | || |||||| || | Sbjct 53980 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGG 53921 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | || || |||||| || |||| ||| || || || Sbjct 53920 ATCTTGGACTTGACGTTATCGATGGTATCCGACGATTCGACTTCCAGCGTAATTGTCTTT 53861 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || |||||||| Sbjct 53860 CCGGTAAGGGTCTTGACGAAAATTTGCAT 53832 Score = 104 bits (114), Expect = 3e-17 Identities = 127/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| || || |||||||||||||| Sbjct 53339 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAA 53280 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| || |||||||| | || | | ||||||||| |||||| |||| | ||| Sbjct 53279 GATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGT 53221 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | | || || ||| || || || | |||||||| ||||| |||| Sbjct 53220 TGTCGATGGTATCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 53170 Score = 102 bits (112), Expect = 9e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||| || || ||||| || || || ||||| | || || Sbjct 53812 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCATCCTCC 53753 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || || |||| |||||||||||| | || | | |||||||||| Sbjct 53752 AACTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGA 53693 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||||| | | | || || |||||||| || | ||| || || ||| Sbjct 53692 ATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTG 53633 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || ||||| || ||||| Sbjct 53632 CCCGTAAGAGTCTTGACAAAAATCTGCAT 53604 >seq41 Length=173993 Score = 116 bits (128), Expect = 4e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| |||||||| | || |||||||||||||| || || | Sbjct 152257 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 152316 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 152317 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACATTGT 152376 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | || ||| || || || || | |||||||| |||||||||| || || || | Sbjct 152377 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 152436 Query 46584 AG 46585 || Sbjct 152437 AG 152438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565232351949120