Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq250 336 3e-87 seq45 131 2e-25 seq21 123 3e-23 seq41 96.9 4e-15 >seq250 Length=39338 Score = 336 bits (372), Expect = 3e-87 Identities = 755/1129 (67%), Gaps = 10/1129 (1%) Strand=Plus/Plus Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 || || || || ||||| | || ||||| || || |||||||| ||||| || | || Sbjct 27480 AAAATTGCAGCCTGGACAGCAGCTCCGTAAGCCACAGCCTCATCAGGGTTGATGGACTTG 27539 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 || | || || ||||| || || || | | | | || ||| | ||||| || || Sbjct 27540 TTGGGCTCCTTGCCGTTGAAGTAGTCGGTGATGAGCTTCTGGATTCTGGGGATACGGGTG 27599 Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198 ||||| ||||| | ||||| || | || || | || |||| ||| | |||| || Sbjct 27600 GATCCTCCGACGAGGACGATCTCGTGAACCTTGGTCTTGTCGAGCTTCGCGTCTGAGAGG 27659 Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 ||||| || | | |||||| | |||| ||||| |||||||| || Sbjct 27660 ACACGGTCGACGGGCTGGAGGGTGGAACGGAAGAGGTCCTGGCACAGCTCCTCAAAGCGG 27719 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 |||||||| || || || ||||||||||| || ||| | | || || || || |||| Sbjct 27720 GCACGGGTGATTGAGGTGTAGAAATCAACACCCTCGAAGAGAGAGTCGATCTCGATGGAG 27779 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || || || | || || | || ||||| || ||||| || || || || | |||||| Sbjct 27780 GTCTGGGCAGAGGACGAAAGAGTGCGCTTGGCACGCTCGCATGCGGTGCGGAGACGACGG 27839 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 |||||||| | ||| | | |||||||||||||| | ||| ||||| | |||| Sbjct 27840 AGGGCACGGGCGTTGGAGCTTAAGTCTTTCTTATGTTTTCTTTTGAACTCGTTGACGAAG 27899 Query 7439 TGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 || | ||| | |||||||| |||||||||||||| || || || || || | Sbjct 27900 TGGTTGACGAGACGGTTGTCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGAC 27959 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 ||||| ||||||||||| | || ||| | | | || ||||| || || |||||||| Sbjct 27960 TTGACCTCAAAGATACCCTCCTCGATGGTGAGGAGAGAGACATCGAAAGTTCCACCACCA 28019 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 || || || || || ||||| || | || ||||| || |||||||| || || Sbjct 28020 AGATCGAAGATCAGGACGTTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAAGCAATG 28079 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 || || || || || || || || ||||| || ||| || || ||||| | ||| Sbjct 28080 GCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACGTTGAGTCCGGCAATGAGACCGGCA 28139 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 || || || || || || || || ||||| ||||| || ||||| || || || |||| Sbjct 28140 TCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAAGCTGGGACGGTGACAACAGCGTTG 28199 Query 7739 GTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGAT 7798 |||| | ||||| || | || || | || ||| ||| || | ||| || Sbjct 28200 TTGACGGTTCCGCCGAGGTAGGCCTCAGCAGTCTCGCGCATCTTGACGAGGATCATGGAG 28259 Query 7799 GAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGG 7856 || ||||| || | | || | || || || || || || || || | || | ||| Sbjct 28260 GAGATCTCCTCGGGTGTGAAGTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAGAC-TGG 28318 Query 7857 GTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCT 7916 || || | | | ||| | ||| | | | | ||||| ||| | ||||||| Sbjct 28319 CTT--GCCTC--CCTTGTCGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCT 28374 Query 7917 GTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGT 7976 ||| | ||||| | ||||| |||||||| || || || || ||||| |||| Sbjct 28375 CGGCGTCGGCGAACTTGCGACCGATCAGACGCTTGGCGTCGAAGACGGTGTTGGCTGGGT 28434 Query 7977 TCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACG 8036 ||||||| ||||||||| || || || ||||| ||||| || | || || || | Sbjct 28435 TCATGGCGACTTGGTTCTTGGCGGCATCACCGATCAGACGCTC---GGTGTCAGTGAAGG 28491 Query 8037 CGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGT 8096 | ||| |||| ||||| || || || || |||||||| ||||| || || | |||||| | Sbjct 28492 CAACGAACGAGGGGGTTGTGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCAT 28551 Query 8097 TTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | ||| || |||||||| || || || || ||||| |||||||| Sbjct 28552 CTCTGAAGATACCCACGCACGAGTAGGTGGTACCCAAATCGATACCGAT 28600 >seq45 Length=170399 Score = 131 bits (144), Expect = 2e-25 Identities = 227/327 (69%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || || ||| || Sbjct 60670 TCGAAATCCTCACCACCCAAGTGGGTGTCACCGGCGGTAGAAAGAACCTCGAAGGCGCCA 60611 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || || || ||||| || || | || | | Sbjct 60610 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTA---GACAATG 60554 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || | | | ||||||| |||||||| |||| || || || ||||| || Sbjct 60553 ATC-TGGCGCTCACCATCGGTCTTATCAAGACCGTAGGCGAGGGCGGCGGCGGTTGGCTC 60495 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | ||| || || ||| || || ||||| | | || || || || ||||||| Sbjct 60494 GTTGACAATGCGGAGGACGTTAAGTCCGGCAATGATACCGGCGTCCTTGGTGGCTTGTCT 60435 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| Sbjct 60434 CTGGTTGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAG 60375 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| ||| ||||| || Sbjct 60374 GTAAGACTCAGCGACATCCTTCATCTT 60348 Score = 102 bits (112), Expect = 1e-16 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| || |||||| ||| | ||||||||| || ||||| |||| || || || | Sbjct 60110 GTGTTCTTTGGGTTCGCGGCAGCTTGGTTCTTGGCTGCGTCTCCGACCAGGCGCTCCTCC 60051 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| |||||||| ||| | ||||||||||| | | ||| Sbjct 60050 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 59994 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || | | || ||| || ||||| || || ||||| ||||| |||||||||||| Sbjct 59993 TCGACCTTGCCATTCTGCATCACACCGACACAAGAGTACGTGGTTCCCAAATCAATACCG 59934 Query 8144 AT 8145 || Sbjct 59933 AT 59932 >seq21 Length=212966 Score = 123 bits (136), Expect = 3e-23 Identities = 222/324 (69%), Gaps = 9/324 (3%) Strand=Plus/Plus Query 7435 GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGT 7494 |||||| |||||| | | ||||||||| | ||||||||||| || || || || || Sbjct 86871 GAAGTGCTCAAGGAGGTTGGTATCGAAATCCTGTCCACCCAAGTGGGTGTCACCAGCAGT 86930 Query 7495 CGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACC 7554 || ||||| |||| ||| || | ||||| | | || ||||| || || ||||| Sbjct 86931 GGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGGAGGGAGACATCGAAAGTTCCACC 86990 Query 7555 ACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT------ATCGAGACC 7608 ||| || || | ||||| ||||| || | | | | ||| | ||||||| Sbjct 86991 ACCGAGATCGTAGATGAGAACGTTACGCTCCTTGGC---GGACTTTCCGGCACCGAGACC 87047 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| || || || || || || || || || || ||||| ||| ||| ||||||||||| Sbjct 87048 GTAAGCAATGGCGGCGGCGGTAGGCTCGTTGATGATACGGAGAACGTTGAGGCCAGCAAT 87107 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | | || || || || ||||| || || ||||| |||||||| ||||| || | Sbjct 87108 GGCACCGGCGTCCTTGGTAGCTTGACGCTGGTTGTCGTTGAAGTAGGCTGGGACAGTGAT 87167 Query 7729 GACCGCGTCCGTGACTTTCTTACC 7752 ||| || | | ||| ||||| || Sbjct 87168 GACGGCCTTGGAGACCTTCTTGCC 87191 >seq41 Length=173993 Score = 96.9 bits (106), Expect = 4e-15 Identities = 199/291 (68%), Gaps = 14/291 (5%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||||||||| || || || ||| | || || || || | ||| Sbjct 110137 ATCGAAATCCTCACCACCCAAGTGGGTGTCACCATTGGTAGACTTAACCTCGAAAACACC 110196 Query 7516 TCCTTCAATGTTTA-ACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 |||| | | | |||| | | ||| || || || ||||| || || | | Sbjct 110197 --CTTCTGGATCTCGAGAACGGAGATATCGAAGGTTCCTCCACCAAGATCGTAGACAGCG 110254 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | | | | || || || ||| ||||||||||| |||| ||| || || || || Sbjct 110255 ATGATTCTGTCCTCCTC------CTTCTCGAGACCGTAAGCGAGAGCAGCGGCGGTAGGC 110308 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691 || || | | ||| ||| ||||||||||||||| ||| | ||||| || || |||| Sbjct 110309 TCGTTGACGACACGGAGAACGTTCAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTT 110366 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742 | || || || ||||| ||||| || ||||| || || || |||| | ||| Sbjct 110367 GACGCTGGGAGTCGTTGAAGTAAGCTGGGACGGTAACAACGGCGTTCTTGA 110417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635126004079040