Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq168 104 2e-17
seq4 100 2e-16
seq41 87.8 1e-12
>seq168
Length=66023
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| || ||||| ||| | || |||| |||| ||| || || |||||
Sbjct 53794 TCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCATCCTCCAACTGCTTACCAGCAAAG 53735
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| ||||||| ||||||
Sbjct 53734 ATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTA 53675
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | || || || | || || || || ||||| |||||||| |||
Sbjct 53674 TCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACA 53615
Query 34971 AAGATCTGCATA 34982
|| |||||||||
Sbjct 53614 AAAATCTGCATA 53603
Score = 82.4 bits (90), Expect = 5e-11
Identities = 148/214 (69%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| || || ||||||||||| ||||| || || | || | || ||
Sbjct 53584 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 53525
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| | || | |||||||||||
Sbjct 53524 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 53465
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| || || || | ||||| || | |||||| || | || |||||
Sbjct 53464 ATCTTCGACTTCAC--AT--TGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGT 53409
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || || ||||| || ||||||||||||
Sbjct 53408 CTTGCCAGTAAGGGTCTTGACGAAGATCTGCATA 53375
>seq4
Length=289853
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826
|||| |||||||||| ||| || ||||| ||||| |||||||||||| | || |
Sbjct 37176 CTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCG 37235
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| || ||||| || ||||| || || || || |||||||| | || | |||||||||
Sbjct 37236 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 37295
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGT 34942
|| ||||| ||||| || | ||||| || | ||| || || | |||
Sbjct 37296 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTATCGGACGACTCCACCTCAAGGGT 37351
Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||| || |||||||| ||||| |||||
Sbjct 37352 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 37390
>seq41
Length=173993
Score = 87.8 bits (96), Expect = 1e-12
Identities = 131/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Plus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| ||||| | ||| |||| || ||||| || || ||||| ||
Sbjct 152259 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 152318
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || |||||||| | || | ||||||||||| ||||||| ||||| || |
Sbjct 152319 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGAC--AT--T 152374
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || || ||| || || | ||| ||||| || ||||| | ||||| ||
Sbjct 152375 GTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 152434
Query 34970 AAAG 34973
|||
Sbjct 152435 GAAG 152438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630213259968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |