Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq122 284 2e-71 seq59 205 2e-47 >seq122 Length=96280 Score = 284 bits (314), Expect = 2e-71 Identities = 842/1277 (66%), Gaps = 61/1277 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| ||| ||||||||||||||||||||||| ||| || ||||||||||||| Sbjct 5603 GTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTAAGGAACTTGGCCTCGGGA 5662 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| |||||| | || || | | || | || || || ||||| || || | | Sbjct 5663 GAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGGCCCTGGACACCAACGGCA 5722 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCG-CTTCTGGCACGGGATAAAAGTTGACGTC 221595 | |||||||| | |||| ||| | | | || || ||||| || |||||||||| Sbjct 5723 ACTGGCCTGTGACGGAAGTTGCT-GCGTCTGGCCTCCGGGACGGGGTAGTAGTTGACGTC 5781 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACC------ACCTCGGTCAGCTTCTG 221649 || | ||||| | |||| ||| ||| |||| |||||| |||||||| Sbjct 5782 AATGATCTTGTTCAAGTTCT---TGACGAC---AACCTGTGTGACCTCGTGAAGCTTCTG 5835 Query 221650 GTGATTGAACACCAACTCGCC---GCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGC 221706 | || ||| ||||| | | | || || | | ||||| Sbjct 5836 G------------AAGTCGTATGTGCCGTTGGCCATG---TCAACGTATGTAGGCAGGGC 5880 Query 221707 AACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGT 221766 || |||| |||||||||||||||||| || | | |||| | |||||||| Sbjct 5881 AAGAGACGCCAAGTTACACACGGCCACCTCATCTGGGGCAGAGTACTCGACAATCTCTGT 5940 Query 221767 ACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826 || |||||| || |||||| || |||| || || || |||||| ||| ||| Sbjct 5941 GCACAGGTTGGAGCTGCGGATGGTACCTAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGC 6000 Query 221827 GTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCA 221886 |||||||| | ||| || || || ||||| ||||| | | ||||| || ||| Sbjct 6001 ATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCA 6060 Query 221887 GAGTTCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTAT 221945 || | ||||| || | || ||| |||||| ||| || || || | Sbjct 6061 AAGCT-TCTGGGCCTTGATGGTCTTGCGACCCTTACCCTC---CTTCTCGTAGCCCTCGT 6116 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| ||||||| || ||||| | || ||| || || || | ||| |||| Sbjct 6117 AGAGCGCCTCAAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTCGTTGGGGCACA 6176 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065 | || |||||| ||| | | || | || ||||||||| ||||||||||| || | Sbjct 6177 TGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAG 6236 Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125 | | || | || | || || |||||| ||||| ||| || ||||| |||| | Sbjct 6237 CATAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGA 6296 Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185 ||||||| | || |||||||| ||||| | |||| ||| | ||| || || ||||||| Sbjct 6297 ACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGT 6356 Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245 |||||||||| || || |||| | |||||| | ||| || | || || | | Sbjct 6357 TGCCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATAC 6416 Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGGC 222303 |||| || |||||||| || |||||| ||||| ||| | || ||| ||| Sbjct 6417 CGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATACGATGGA 6473 Query 222304 AG-ACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 | || |||||||| ||||| || ||| ||||||||||| || ||||||| ||||| Sbjct 6474 TGTTCAATCCGATACCTCCGGCAGTCTTT-GAGATCATGGCACACGTCTTGAGTGTGTCA 6532 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||| ||||| ||| |||||||| | || | || || || ||||||| ||| | | Sbjct 6533 TAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCT 6592 Query 222422 T-TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480 | ||||| | || || || || ||||| || ||||||||| ||||| |||||| Sbjct 6593 TGTGGTGTACCA-GCATTGAAGAGCGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACAT 6651 Query 222481 CAGATCGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATC 222539 || | ||| ||||| | | || | | || | || |||||||| || ||| | Sbjct 6652 GAGGTTGTATGTCTCGATTGTCT-TCTCAATATCCTCACCGTGAATGCCCACGGCAACAC 6710 Query 222540 TCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAGCAGGTA 222594 ||| ||||| ||| ||||||| ||| | ||||| || ||||| ||||| Sbjct 6711 GCATAATCATGTGCTGTGGCCTCT---CAGCAACCTTGCCATCAAGGCGGAGA--AGGTA 6765 Query 222595 CGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGA-GGTCAAAGTCTCTGCCGTGAACCA 222653 |||| || ||||||||||| || ||||| |||| || || || | | ||| || | Sbjct 6766 CGATCGCTCAAGAGTCTTGAAGCCGAAGTA-TTGATAGTTGAAATCACGGTCGTAAAGGA 6824 Query 222654 CGGCGGCGTCCAGCTCC 222670 |||||| || |||||| Sbjct 6825 CGGCGGAGTTAAGCTCC 6841 >seq59 Length=149784 Score = 205 bits (226), Expect = 2e-47 Identities = 557/854 (65%), Gaps = 16/854 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || |||||| || || ||||||||||| Sbjct 65241 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 65300 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 65301 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATTTCC 65360 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || ||||| || || || |||||||| || |||| | Sbjct 65361 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 65420 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || || | || ||| || |||||||||||||| || ||| Sbjct 65421 TTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 65480 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 65481 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAGGAGCAA 65537 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | | | || || || |||||||||| ||| || ||||||||| |||||| Sbjct 65538 GCTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGC 65596 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | | || | | || || | |||| || || || Sbjct 65597 CGACTGGGCAGTTAGGTGGATCCAAGACAAGGACTCCACTTTCGCTCAGCGTCTCGTTGC 65656 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||| || || || ||||| ||||| ||| |||||| || || |||| |||||||| || Sbjct 65657 CTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGCTGAA 65716 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||| | || ||| ||| ||||||||||||||| | | |||||||| Sbjct 65717 GAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGG 65776 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069 |||||||| || || |||||||| |||| | | |||| | ||| || || Sbjct 65777 TCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---CCACCTTAGACAC-CGCCCAAGCA 65832 Query 26070 AG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 || || ||||| | |||| | |||||||| |||||| | ||||| | Sbjct 65833 AGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCCTGACTG 65892 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| || | |||| ||||||||||||| Sbjct 65893 AGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGT 65952 Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || |||||| |||||| | || || || | ||||| || | |||| Sbjct 65953 TCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGGCCAACC 66012 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| || |||| ||| |||||||||||||| || ||| | | Sbjct 66013 CCTTCGACTTCATGGAGAACATCTCCTTGGCAGGAAAGACCAACTTCTTCGAGAAGCGTG 66072 Query 26309 TCGGCGACTATCAA 26322 | | |||||| ||| Sbjct 66073 TTGCCGACTACCAA 66086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834861360640