Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq122 127 6e-24
seq59 111 5e-19
seq10 102 2e-16
seq19 91.5 4e-13
>seq122
Length=96280
Score = 127 bits (140), Expect = 6e-24
Identities = 598/945 (63%), Gaps = 11/945 (1%)
Strand=Plus/Plus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||| |||||||| ||||| || || ||| | | | ||| || ||||||||
Sbjct 5880 CAAGAGACGCCAAGTTACACACGGCCACCTCATCTGGGGCAGAGTACTCGACAATCTCTG 5939
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
||||||||| || || |||||| |||| ||||||||||| || | ||| ||||
Sbjct 5940 TGCACAGGTTGGAGCTGCGGATGGTACCTAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAG 5999
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766
|||||||||| | ||| | ||| |||||||||| |||| | || ||||| ||
Sbjct 6000 CATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACC 6059
Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACA 155826
| || | |||| || || |||| | || ||| ||| || | || |
Sbjct 6060 AAAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGA 6119
Query 155827 GCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886
||| | || || |||||| || || ||||||||| | | |||||| | |
Sbjct 6120 GCGCCTCAAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGA 6179
Query 155887 GCGACCA---AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943
| | ||| || || | ||||||| ||| || | ||| ||| | ||
Sbjct 6180 GGGTCCAGTCGCCGTTCTTCTC---AACACGCTTCATGAAGAGATCCGGGATCCAGAGAG 6236
Query 155944 CATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
||||||| | ||| | | | ||| ||||| | |||||| ||||| | || || | |
Sbjct 6237 CATAGAACAAGTCAC-GGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGG 6295
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCA---TTCCTC 156059
|| || | ||| | || |||||| | || || || ||| |||| | |
Sbjct 6296 AACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTG 6355
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
||||||||||| || || |||| || || || ||||| || | ||||| |||| |||
Sbjct 6356 TTGCCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATA 6415
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| || || | || ||||| ||| ||| | | ||||| | || | | ||| ||
Sbjct 6416 CCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATG 6475
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
| | ||| ||||| || | || || || || || ||| | || | |
Sbjct 6476 TTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAG 6535
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
||||| |||||| ||| || | ||| | | |||| || | || | | ||
Sbjct 6536 ATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGT 6595
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359
||||| ||||| ||||| || || || | || || | || || || ||||||
Sbjct 6596 GGTGTACCAGCATTGAAGAGCGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGG 6655
Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419
| ||||||||| | ||||||||| || |||||||| | | | || | |||
Sbjct 6656 TTGTATGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACGGCAACACGCATA 6715
Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479
||| ||||| || | ||| ||| | ||||||| || |||||||| | || ||
Sbjct 6716 ATCATGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGGTACGATCGCTCA 6775
Query 156480 AGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAA 156524
||||| || || ||||| || | | | |||||||||| ||||
Sbjct 6776 AGAGTCTTGAAGCCGAAGTATTGATAGTTGAAATCACGGTCGTAA 6820
>seq59
Length=149784
Score = 111 bits (122), Expect = 5e-19
Identities = 200/287 (70%), Gaps = 4/287 (1%)
Strand=Plus/Plus
Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGCCATTAG 133431
|| || || || |||||||| || | || | ||||| || | ||||| ||||| |
Sbjct 65511 CTCATCGACACATACATCAAGGAGCAAGCTCA-ACGCACATACCTCTTCAATGCCATC-G 65568
Query 133432 CGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490
|| ||||||| || || ||||| | |||||||| ||| |||||||| ||||||
Sbjct 65569 AGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGACAAGG 65628
Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550
| | ||| ||| ||||||||||| || || | || ||||| || || ||| |
Sbjct 65629 ACTCCACTTTCGCTCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCG 65688
Query 133551 GTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610
|| | ||| ||| ||||| ||||| || ||||||||| | | |||| ||| || |
Sbjct 65689 GTTCCTTCGCCTCCATTTTCTGGCTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCT 65748
Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
| ||||| || || || | ||||||| || ||||| || || |||
Sbjct 65749 CCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCC 65795
>seq10
Length=251658
Score = 102 bits (112), Expect = 2e-16
Identities = 107/140 (76%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| |||| ||||| |||||||| |||||||||
Sbjct 160541 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTT---CTTGGACGACACACCAGCA 160597
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||||||||| || || | || |||| |||||||| ||| ||| || ||||
Sbjct 160598 AAATGGAAAGTATTGAGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGA 160657
Query 301933 ATACCAACCATTTCTCCTGG 301952
||||| ||||| || || ||
Sbjct 160658 ATACCGACCATCTCGCCAGG 160677
>seq19
Length=223679
Score = 91.5 bits (100), Expect = 4e-13
Identities = 113/152 (74%), Gaps = 6/152 (4%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || ||||||||| ||||| || ||||| |||||||||| ||| || |
Sbjct 127589 TGAGCAATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATA 127648
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955
|| || |||||| |||||||||| ||| | ||| || | || || ||||||||
Sbjct 127649 CCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTGATACCGATTGTTCCCTTC 127705
Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||||| ||| |||||||||||
Sbjct 127706 TGTCCGTGACGAGAGGCGAATTTATCACCAAT 127737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471801457840472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |