Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq122 127 6e-24 seq59 111 5e-19 seq10 102 2e-16 seq19 91.5 4e-13 >seq122 Length=96280 Score = 127 bits (140), Expect = 6e-24 Identities = 598/945 (63%), Gaps = 11/945 (1%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| |||||||| ||||| || || ||| | | | ||| || |||||||| Sbjct 5880 CAAGAGACGCCAAGTTACACACGGCCACCTCATCTGGGGCAGAGTACTCGACAATCTCTG 5939 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||||||||| || || |||||| |||| ||||||||||| || | ||| |||| Sbjct 5940 TGCACAGGTTGGAGCTGCGGATGGTACCTAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAG 5999 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 |||||||||| | ||| | ||| |||||||||| |||| | || ||||| || Sbjct 6000 CATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACC 6059 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACA 155826 | || | |||| || || |||| | || ||| ||| || | || | Sbjct 6060 AAAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGA 6119 Query 155827 GCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 ||| | || || |||||| || || ||||||||| | | |||||| | | Sbjct 6120 GCGCCTCAAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGA 6179 Query 155887 GCGACCA---AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943 | | ||| || || | ||||||| ||| || | ||| ||| | || Sbjct 6180 GGGTCCAGTCGCCGTTCTTCTC---AACACGCTTCATGAAGAGATCCGGGATCCAGAGAG 6236 Query 155944 CATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002 ||||||| | ||| | | | ||| ||||| | |||||| ||||| | || || | | Sbjct 6237 CATAGAACAAGTCAC-GGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGG 6295 Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCA---TTCCTC 156059 || || | ||| | || |||||| | || || || ||| |||| | | Sbjct 6296 AACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTG 6355 Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 ||||||||||| || || |||| || || || ||||| || | ||||| |||| ||| Sbjct 6356 TTGCCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATA 6415 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || || || | || ||||| ||| ||| | | ||||| | || | | ||| || Sbjct 6416 CCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATG 6475 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 | | ||| ||||| || | || || || || || ||| | || | | Sbjct 6476 TTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAG 6535 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 ||||| |||||| ||| || | ||| | | |||| || | || | | || Sbjct 6536 ATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGT 6595 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 ||||| ||||| ||||| || || || | || || | || || || |||||| Sbjct 6596 GGTGTACCAGCATTGAAGAGCGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGG 6655 Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419 | ||||||||| | ||||||||| || |||||||| | | | || | ||| Sbjct 6656 TTGTATGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACGGCAACACGCATA 6715 Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479 ||| ||||| || | ||| ||| | ||||||| || |||||||| | || || Sbjct 6716 ATCATGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGGTACGATCGCTCA 6775 Query 156480 AGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAA 156524 ||||| || || ||||| || | | | |||||||||| |||| Sbjct 6776 AGAGTCTTGAAGCCGAAGTATTGATAGTTGAAATCACGGTCGTAA 6820 >seq59 Length=149784 Score = 111 bits (122), Expect = 5e-19 Identities = 200/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGCCATTAG 133431 || || || || |||||||| || | || | ||||| || | ||||| ||||| | Sbjct 65511 CTCATCGACACATACATCAAGGAGCAAGCTCA-ACGCACATACCTCTTCAATGCCATC-G 65568 Query 133432 CGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490 || ||||||| || || ||||| | |||||||| ||| |||||||| |||||| Sbjct 65569 AGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGACAAGG 65628 Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550 | | ||| ||| ||||||||||| || || | || ||||| || || ||| | Sbjct 65629 ACTCCACTTTCGCTCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCG 65688 Query 133551 GTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610 || | ||| ||| ||||| ||||| || ||||||||| | | |||| ||| || | Sbjct 65689 GTTCCTTCGCCTCCATTTTCTGGCTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCT 65748 Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | ||||| || || || | ||||||| || ||||| || || ||| Sbjct 65749 CCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCC 65795 >seq10 Length=251658 Score = 102 bits (112), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| |||||||| ||||||||| Sbjct 160541 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTT---CTTGGACGACACACCAGCA 160597 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||||||||| || || | || |||| |||||||| ||| ||| || |||| Sbjct 160598 AAATGGAAAGTATTGAGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGA 160657 Query 301933 ATACCAACCATTTCTCCTGG 301952 ||||| ||||| || || || Sbjct 160658 ATACCGACCATCTCGCCAGG 160677 >seq19 Length=223679 Score = 91.5 bits (100), Expect = 4e-13 Identities = 113/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || ||||||||| ||||| || ||||| |||||||||| ||| || | Sbjct 127589 TGAGCAATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATA 127648 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955 || || |||||| |||||||||| ||| | ||| || | || || |||||||| Sbjct 127649 CCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTGATACCGATTGTTCCCTTC 127705 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||||| ||| ||||||||||| Sbjct 127706 TGTCCGTGACGAGAGGCGAATTTATCACCAAT 127737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471801457840472