Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq59 123 3e-22 seq122 118 1e-20 seq30 118 1e-20 seq254 116 5e-20 seq163 116 5e-20 seq68 91.5 2e-12 >seq59 Length=149784 Score = 123 bits (136), Expect = 3e-22 Identities = 203/287 (71%), Gaps = 7/287 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | |||||| |||| ||||| | |||||| || ||||| Sbjct 65777 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGACCACGCTT 65718 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| || |||| | ||| || ||||| ||||| ||||| |||||||| || Sbjct 65717 CTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGCGGCGAA 65658 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC-CTTGTTGATCCACTTCATCGCCC 869357 | | | ||| |||| || || ||| ||| || | |||| ||||||| | | |||| Sbjct 65657 GGCAACGAGACGCTGAGCGAAAGTG--GAGTCCTTGTCTTG--GATCCACCTAACTGCCC 65602 Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTT 869416 |||||||||| ||| | | | || | || |||||||| ||||||| || | | Sbjct 65601 AGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC-GT 65543 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | || | ||||||| || |||||||| ||||| || || ||||| Sbjct 65542 TGAGCTTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTC 65496 Score = 120 bits (132), Expect = 4e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| ||| | || ||| |||||| ||||||||||| || | | ||||| |||||| Sbjct 66083 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAAGGAGATGTTCTCCAT 66024 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| || |||||||| ||| ||| ||||| || ||||| | Sbjct 66023 GAAGTCGAAGGGGTTGGCCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCT 65964 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||||||| ||||| ||||| || ||| | | |||||||||||||| ||||| Sbjct 65963 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 65904 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 || || | ||| ||| ||||||| |||||| ||| |||||| Sbjct 65903 GGGAAGTGCCTCAGTCAGGAACTCTTGCTCGATGCTGACAGCCTCG 65858 >seq122 Length=96280 Score = 118 bits (130), Expect = 1e-20 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | ||| |||| ||| || |||||||||||||| |||| ||||| || Sbjct 6364 CTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATACCGTTCGA 6423 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | |||||||| || || | ||| || || | ||| || | || | || || Sbjct 6424 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCC 6483 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || ||||| | ||| ||||| | || ||| ||||| ||||| ||||| ||||| Sbjct 6484 GATACCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTC 6543 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || |||||||||| || | ||||| ||||| || | || | || || Sbjct 6544 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGTGGTGTACC 6603 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 || ||||||||||| || Sbjct 6604 AGCATTGAAGAGCGTTGG 6621 >seq30 Length=186486 Score = 118 bits (130), Expect = 1e-20 Identities = 396/598 (66%), Gaps = 24/598 (4%) Strand=Plus/Minus Query 1852061 TCGCTGGCGCTCATCTT-GCCGCTCTCGGTGAGGCCCGGCACGAGCGGGTTGAGCAGGTG 1852119 ||||||||||||||||| || || |||| ||||| || | | | ||| | ||||| Sbjct 151150 TCGCTGGCGCTCATCTTCGCTGC-CTCGCCCAGGCCAGGGATCATGGTGTTCATTAGGTG 151092 Query 1852120 GAAGCG--CTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTTG 1852177 ||| ||| || |||| | || |||| || ||||| | ||| |||||| Sbjct 151091 AGCGCGGACTTTGTAT--CCGATGCGTGGGAGGTTCTCCATAGCAAACGTAAAAATCTTG 151034 Query 1852178 CGCTGGTCG-CGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTG 1852236 ||||| || ||||| || ||||| |||||||||||||||| |||||| || || ||||| Sbjct 151033 CGCTGATCCACGCCC-CCGAACTGCGCGTCGACGTCGAGGTACTGCTCATCCAGCGCCTG 150975 Query 1852237 CATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGT-TGCGGTCCATCTTGACCACCTGAG 1852295 |||||| ||||| | || | ||| ||||| |||| | ||| ||||||| | Sbjct 150974 CATGAGGGGGTAAATCAATCCCCCCAGCGTCGGGTCATCGGT-CTGCTTCACCACCTCCG 150916 Query 1852296 CGGCGGCCTTTTGCGCCGTGCCGGTGCGCACGTGCGCC-GCGAGTCGGTAGAGGTCGAGC 1852354 | | ||||| || || || ||||| | |||| |||| | || | || | Sbjct 150915 CTCCCGCCTTCTGGGCGACGCTAATGCGC-GTTACGCCTTCGAGCTTGAAGCGATCCATG 150857 Query 1852355 GCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGAGTCCGCCCAGCGG- 1852413 | ||| | ||| |||||| | | || |||| || ||||| | || || Sbjct 150856 GTGTATTCCTTGCCTAGCTGGTAGGAGCTTCCCAGCACGAATTCGAG--GAGCGAGAGGT 150799 Query 1852414 -CACGCCGATGTGCTGGAGCATGGCCTTGAT--GGC-AAACTCGTA-CCAGCGGCACCGG 1852468 |||||||| | | |||| || ||||| ||| | | ||| ||||| ||| Sbjct 150798 CCACGCCGACGGCGCGAAGCAGTGCTTTGATGAGGCGCGAGTAGTAGGCAGCG----CGG 150743 Query 1852469 TGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGTCGGCAAAG 1852528 ||||| || || ||| | || ||| ||||||| | |||| | ||| || | | Sbjct 150742 AACTCGACGAGCTCGAGCGGGGCTTTCATGTTATCGAGGTAGCCGTGGATGTCTGCGAGG 150683 Query 1852529 AGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAG 1852588 || |||||||| | || || ||| ||| | ||||| | |||| |||||| || ||| Sbjct 150682 AGAATCTTGACGTGGCATCCTGCCGCGAGGAGCTCGGCGATCTTGATGATGGGGACGAAG 150623 Query 1852589 TAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGGGGGCGCT 1852646 ||| | ||||||| || || | ||| |||||||| || | |||| ||||||| Sbjct 150622 TAGGCGCAGTGCGGGCGCCCTGTTGTCGCAGTGCCCCAGTAGACCTTCAGCGGGCGCT 150565 >seq254 Length=38705 Score = 116 bits (128), Expect = 5e-20 Identities = 125/163 (77%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 1592131 GTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCG 1592189 ||||||| || |||| ||| | ||||| || | ||||| ||| | ||||| ||| Sbjct 26030 GTGGGACCAGAAGTTCATGCAA-GTCGACCAAGAGATGCTCTTCGAGATCATCCTTGCCT 25972 Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||||||||| ||||||||||| || |||||| | ||||||||| | ||||| || |||| Sbjct 25971 CCAACTACCTGGACATCAAGCCGCTCCTCGATGTCGGGTGCAAGACGGTGGCGAATATGA 25912 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 | ||||| ||| || |||||||| | ||||| ||||| || Sbjct 25911 TTAAGGGGAAGAGCCCGGAGGAGATTAGGAAGACGTTTAATAT 25869 >seq163 Length=69589 Score = 116 bits (128), Expect = 5e-20 Identities = 122/159 (77%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 ||||||||||||| ||| | || || ||||| | ||||| || |||||||| | Sbjct 58650 AGGACAGCATCGGTGGCGCCGTCACCTGCGTCATCAGGAACGTCCCTAGCGGCCTCGGTG 58709 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| ||||| |||||||| ||||| |||||||||||||||||| ||||| |||| Sbjct 58710 AGCCCTGCTTCGACAAGATGGAGGCTATGCTCGCCCACGCCATGCTCAGCATCCCCGCCA 58769 Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||||| || ||||| ||| ||| || |||| |||| Sbjct 58770 CCAAGGGCTTTGAGATCGGCTCCGGCTTCGGCGGCTGCG 58808 >seq68 Length=137826 Score = 91.5 bits (100), Expect = 2e-12 Identities = 124/168 (74%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 733083 CCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGCGTG 733142 |||||| | ||||||||| | || || |||||||| ||||||||| ||| || | | Sbjct 121702 CCCGAGCTCGGCGACAAATTCTCCTCCCGCCACGGTCAAAAGGGCGTCGTCGGTCTCAT- 121760 Query 733143 CGCTCCA-CCGAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGTGAT 733201 ||| ||| || | ||| | |||| |||||| | |||| ||| |||||||| | || Sbjct 121761 CGCCCCAGCCCAAGACCTCCCCT--TCGCCGA-CACCGGCATCACCCCCGACATAATCAT 121817 Query 733202 CAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGA 733249 ||||| |||| |||| || |||||||| | ||||||||||| || Sbjct 121818 GAACCCCCACGGTTTCCCCTCCCGCATGACAGTCGGCAAGATGCTGGA 121865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107068952631352