Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq59 147 3e-29 seq30 116 6e-20 seq254 113 7e-19 seq122 105 1e-16 seq16 96.9 5e-14 >seq59 Length=149784 Score = 147 bits (162), Expect = 3e-29 Identities = 233/329 (71%), Gaps = 5/329 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | |||||| ||| ||||| | |||||| || ||||| Sbjct 65777 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGACCACGCTT 65718 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||| || |||| ||| || ||||| ||||| ||||| |||||||| || Sbjct 65717 CTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGCGGCGAA 65658 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | ||||| |||| || |||||| || || | | | | ||||||| | | ||||| Sbjct 65657 GGCAACGAGACGCTGAGCGAAAGTGG--AGTCCTTGTCT-TGGATCCACCTAACTGCCCA 65601 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTCCTTCT 794578 || ||||| ||| | | | || | || |||||||| ||||||| || | | Sbjct 65600 GTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTG 65541 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | | ||||||| ||| |||||||||||||| ||||| ||||| | ||| ||||| | Sbjct 65540 AG-CTTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCT 65482 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| ||| ||||| || || |||||| Sbjct 65481 CGATCATGATTTGGAAACCGTAGAAGCAG 65453 Score = 125 bits (138), Expect = 1e-22 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||| | || ||| |||||| ||||||||||| || | | ||||| |||||| Sbjct 66082 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAAGGAGATGTTCTCCATG 66023 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| |||||||||| | ||||| ||||||| ||||| || ||||| | | Sbjct 66022 AAGTCGAAGGGGTTGGCCGACTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCTG 65963 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| |||||||| || ||| | | |||||||||||||| ||||| | Sbjct 65962 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 65903 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || || | ||| | | ||||||| |||||| ||| |||||| | |||| Sbjct 65902 GGAAGTGCCTCAGTCAGGAACTCTTGCTCGATGCTGACAGCCTCGGTAATGA 65851 Score = 91.5 bits (100), Expect = 2e-12 Identities = 153/219 (70%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | ||| || || | ||||||||| | ||||||| || |||||||| Sbjct 65458 AAGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTG 65399 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 || || ||||| |||||||| || ||||| ||||| || |||| ||||| ||| Sbjct 65398 ACAATTCCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAGCGCTCATCG 65339 Query 796261 TCGCTGAG-CGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| |||| || | ||||| | ||| | ||| || | |||||| || ||| Sbjct 65338 TCGTTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTC 65279 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 || || || ||||||||||| |||||||||| ||| ||| Sbjct 65278 CAGAAAGACGCCTCGGCCTTCTTGTACATCTGCCAGATC 65240 >seq30 Length=186486 Score = 116 bits (128), Expect = 6e-20 Identities = 404/610 (66%), Gaps = 38/610 (6%) Strand=Plus/Minus Query 2411382 GAGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGG 2411441 |||||||||||| | | ||||||||||||||||| | ||| | ||||| || Sbjct 151172 GAGATCAATCTTACTATCCGGGTCGCTGGCGCTCATCTTCGCTGCCTCGCCCAGGCCAGG 151113 Query 2411442 CACCAGCGGGTTGAGCAGGTGGATGCG--CTTGCGGTAGCCCA-GCGCCGGCAGGTGGTC 2411498 | || | ||| | ||||| ||| ||| ||| || | ||| || |||| || Sbjct 151112 GATCATGGTGTTCATTAGGTGAGCGCGGACTTT--GTATCCGATGCGTGGG-AGGTTCTC 151056 Query 2411499 GCGCGCAAAGGCAAAGATCTTGCGCTGGTCG-CGCCCGCCAAACTGGGCGTCGACGTCGA 2411557 ||||| | ||| ||||||||||| || ||||| || ||||| ||||||||||||| Sbjct 151055 CATAGCAAACGTAAAAATCTTGCGCTGATCCACGCCC-CCGAACTGCGCGTCGACGTCGA 150997 Query 2411558 GGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGT-TG 2411616 ||| |||||| || || ||||||||||| ||||| | | | |||| ||||| Sbjct 150996 GGTACTGCTCATCCAGCGCCTGCATGAGGGGGTAAATCAATCCCCCCAGCGTCGGGTCAT 150937 Query 2411617 CGGTCCATCTTGACCACCTGGGCGGCGGCCTTTTGCGCCGTGCCGACGGTCACGCG---- 2411672 |||| | ||| ||||||| || | ||||| || | ||||| | | ||| Sbjct 150936 CGGT-CTGCTTCACCACCTCCGCTCCCGCCTTCTG------GGCGACGCTAATGCGCGTT 150884 Query 2411673 -CGCCGTC-AGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCG 2411730 |||| || || ||| | || | ||||| | ||| ||||||| ||| || Sbjct 150883 ACGCCTTCGAGCTTGAAGCGATCCATGGTGTATTCCTTGCCTAGCTGGTAGGAGCTTCCC 150824 Query 2411731 CGCACAAATTCGAGACGATCCAGCGG--GACGCCAATGTGCTGGAGCATGGCCTTGAT-- 2411786 |||| |||||||| || | || || ||||| | | | |||| || ||||| Sbjct 150823 AGCACGAATTCGAG--GAGCGAGAGGTCCACGCCGACGGCGCGAAGCAGTGCTTTGATGA 150766 Query 2411787 GGC-AAACTCGTA-CCAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTG 2411844 ||| | | ||| ||||| ||| ||||||||| || ||| | || || Sbjct 150765 GGCGCGAGTAGTAGGCAGCG----CGGAACTCGACGAGCTCGAGCGGGGCTTTCATGTTA 150710 Query 2411845 TCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAG 2411904 ||||||| | |||| | ||| || | ||| ||| | || | ||||| ||| ||| | Sbjct 150709 TCGAGGTAGCCGTGGATGTCTGCGAGGAGAATCTTGACGTGGCATCCTGCCGCGAGGAGC 150650 Query 2411905 TCGGCCAGTTTAAAGATGGGCACAAAGTA-GCCCAGATGGGGCTTGCCC-GTCGGCGCGG 2411962 ||||| | || | |||||| || ||||| || ||| |||| |||| || | ||| | Sbjct 150649 TCGGCGATCTTGATGATGGGGACGAAGTAGGCGCAGTGCGGGC--GCCCTGTTGTCGCAG 150592 Query 2411963 TGCCCCAATA 2411972 ||||||| || Sbjct 150591 TGCCCCAGTA 150582 >seq254 Length=38705 Score = 113 bits (124), Expect = 7e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673 ||||||||| | ||||| ||| | ||||| ||| |||||||||| ||||||||||| Sbjct 26008 GTCGACCAAGAGATGCTCTTCGAGATCATCCTTGCCTCCAACTACCTGGACATCAAGCCG 25949 Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733 ||||||||| | ||||||||||| ||||| || | || ||||| ||| || ||||| Sbjct 25948 CTCCTCGATGTCGGGTGCAAGACGGTGGCGAATATGATTAAGGGGAAGAGCCCGGAGGAG 25889 Query 2035734 ATCCGCAAGACCTTTAACAT 2035753 || | ||||| ||||| || Sbjct 25888 ATTAGGAAGACGTTTAATAT 25869 >seq122 Length=96280 Score = 105 bits (116), Expect = 1e-16 Identities = 178/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | ||| |||| ||| || |||||||||||||| || | ||||| || Sbjct 6364 CTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATACCGTTCGA 6423 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||||| || || | ||| || || | ||| || | || | || || Sbjct 6424 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCC 6483 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | ||| ||||| | || ||| | || || || || ||||| ||||| Sbjct 6484 GATACCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTC 6543 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || || |||||||||| | || ||||| ||||| || | | | || || Sbjct 6544 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGTGGTGTACC 6603 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 |||||||||||||| || Sbjct 6604 AGCATTGAAGAGCGTTGG 6621 >seq16 Length=230287 Score = 96.9 bits (106), Expect = 5e-14 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263 || ||||| ||| | |||| || || |||||||| || | ||||| | ||||| || Sbjct 15971 GGACGCCAAAAGCTTGTCATTCTTGACGAGGCCGATAGCATGACGTCTGGTGCCCAACAA 16030 Query 2019264 GCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAA 2019322 ||||| || ||| |||||||| | ||| | || || || || || | || ||||| Sbjct 16031 GCCCTGCG-TCGCACCATGGAGATCTACTCTTCGACCACCCGCTTCGCATTCGCATGCAA 16089 Query 2019323 CACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCG 2019382 ||| | | ||||||| |||| ||| |||||||||||||| ||||||||| | Sbjct 16090 TCAGTCCAACAAGATCATCGAGCCCCTGCAGTCACGTTGCGCCATCTTACGCTTTGCGAG 16149 Query 2019383 CCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439 || || || || || ||| ||| || | | | |||||||| || || ||||| Sbjct 16150 GCTGACGGATGCACAAGTCGTGAAGCGCCTACTCCAAATTATCGAGGCGGAGAAGGT 16206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916155343375784