Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq122 149 6e-31 seq168 125 7e-24 seq4 118 1e-21 seq41 93.3 4e-14 >seq122 Length=96280 Score = 149 bits (164), Expect = 6e-31 Identities = 835/1321 (63%), Gaps = 43/1321 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 |||||| ||| || ||||| || ||||||||||||||||| | | || || |||| Sbjct 5105 GACTGGGACTGATCGATGAAGGCTCCACGGTCAGCGGCCATCTGGACGATGGTGCGCTGG 5164 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 ||||||||| | |||||||| || ||| || | |||| ||| | |||| Sbjct 5165 GAG---ATCTCCCAGACGGTCTTGTAGAGGGCCTTAATGTCGGCGGGGATGTTGGGGATG 5221 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || || | || || | || | || ||| | ||| | | || Sbjct 5222 TTCTGGATGGAACCTCCGTCTGCGATGATGCGGTTCTTCATGTTGTCGGACCACAGACCC 5281 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| || ||| | || || | | || || || || |||||||| || || || Sbjct 5282 ATGTCGACCAAGTCCTTGAGCAACCAGGGGTTGACGACTTGGAACTCGCCAGCCAGGACA 5341 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| || | ||| || | || || || |||||||| ||| | |||||| Sbjct 5342 CGGCGCGAGTAAATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGG 5401 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | || ||||||||| || || ||||| |||||||| | |||| | | || Sbjct 5402 GAGGTGGAAGCAGTGGGCATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTG 5461 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || | | ||| |||| |||||||||| || | || || ||| |||||||||| Sbjct 5462 ATCTGGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGGGTGACGCCCCACATGTCG 5521 Query 148470 TACTGCAGAATG-CCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 ||||| || | || || | || | | |||||||| | ||| | ||||| Sbjct 5522 TACTGGAGCTCGCCCTTGGACACTGGTGAT-CCCTCGTAGGTCTCGTATGTGCCGTGGAT 5580 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | ||||| || | || | || |||| ||| || ||||| || || Sbjct 5581 CTGGGCCAGCTCCACGGAGGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGA 5640 Query 148589 GTTGAGCAGCGCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||| || | | || |||| ||| | || | || || || || || || Sbjct 5641 GTTAAGGAACTTGGC---CTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATC 5697 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||||||||||| || || ||| ||| |||| ||| | |||| | | | || Sbjct 5698 AGCAAGGCCCTGGACACCAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGTCTGGCCTC 5757 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | || || |||| |||| ||| ||||||||| ||||| || || || |||| || Sbjct 5758 CGGGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAG-TTCTTGACGACAACCTGTG 5816 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATG-CATCG---GT--TCA 148818 | | | | ||| | || ||||| || | | | ||| || || || || Sbjct 5817 TGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACGTATGTAGGCA 5876 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 ||| | ||| || | || ||||||||| |||||| ||||| |||||| || |||| Sbjct 5877 GGGCAAGAGACGCCAAGTTACACACGGCCACCTCATCTGGGGCAGAGTACTCGACAATCT 5936 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 | | |||||| ||| || ||| || | |||||| || |||||||||| ||||| Sbjct 5937 CTGTGCACAGGTTGGAGCTGCGGATGGTACCTAGGTTCTTCTGGTTGCTCTTGCGGTTGC 5996 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GA 148995 | || |||||||||| |||| | || || || || ||| | || | || | Sbjct 5997 AAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGT 6056 Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCG------ACCCTCCTGCTCGT 149049 ||| | || | ||| || |||| || || | ||| |||||||| ||||| Sbjct 6057 ACCAA---AGCTTCTGGGC-----CTTGATGGTC-TTGCGACCCTTACCCTCCTTCTCGT 6107 Query 149050 ATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGT 149109 | || ||| ||| ||| | |||||||| || | | || ||||| | || Sbjct 6108 AGCCCTCGTAGAGCGCCTCAAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTCGT 6167 Query 149110 GCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCA 149169 ||||||||||| | ||| |||||| | | || |||||||| || ||||| || | Sbjct 6168 TGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGA 6227 Query 149170 CCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCA 149229 |||||| || || | | ||| || || | || || ||| ||| | || Sbjct 6228 TCCAGAGAGCATAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCA 6287 Query 149230 GGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289 ||| || | || | ||||||||||| ||||| | ||| | |||| || || Sbjct 6288 GGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAG 6347 Query 149290 TGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346 |||| ||||| |||||||| |||| | | | ||||||| ||||| || | ||| | Sbjct 6348 GGCGCTTGTTGCCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGG 6407 Query 149347 G 149347 | Sbjct 6408 G 6408 >seq168 Length=66023 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| ||| |||||| ||||||||||| Sbjct 53572 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACC-GTCCTCAAGCTGCTTGCC 53514 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| |||| || ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 53513 CGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTT 53454 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || || | |||| ||| ||||| || || || Sbjct 53453 CACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTAAGGGT 53394 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 53393 CTTGACGAAGATCTGCAT 53376 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| || |||||||| || ||| | | | ||||| | Sbjct 53809 AAATGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCA-TCCTCCAA 53751 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || || ||||||||||| ||||| || || |||||||| || Sbjct 53750 CTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAAT 53691 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| || || | | ||||| || | || | || ||||| Sbjct 53690 CTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTGCC 53631 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || ||||||||||| Sbjct 53630 CGTAAGAGTCTTGACAAAAATCTGCAT 53604 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| || || | | | || || ||||||||||| Sbjct 54028 GTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCA-TCTTCAAGCTGCTTGCC 53970 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| |||| || ||||||||||| || |||||||| ||||| || |||||| ||| Sbjct 53969 CGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTGGACTT 53910 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | | || || || | || | || || ||||| || || Sbjct 53909 GACGTTATCGATGGTATCCGACGATTCGACTTCCAGCGTAATTGTCTTTCCGGTAAGGGT 53850 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 53849 CTTGACGAAAATTTGCAT 53832 >seq4 Length=289853 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||| ||||| || ||||| || | ||| |||||||||| Sbjct 37185 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 37244 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || ||||||||||| || || || || |||||||| |||| Sbjct 37245 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATC 37304 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | || |||| | |||||| || | ||||| || ||||| Sbjct 37305 TTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCC 37364 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 ||||| || || ||||| || |||||| || Sbjct 37365 GTCAGGGTCTTCACGAAGATTTGCATGACT 37394 >seq41 Length=173993 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| || | || || ||||||||||| ||||| || || |||||| Sbjct 152292 TCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTG 152351 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | || |||| || ||| || || | ||||| | Sbjct 152352 TCCTGAATCTTCGACTTGACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATG 152411 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| |||| || || ||||| Sbjct 152412 GTCTTGCCCGTCAAGGTCTTGACGAA 152437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415627397440