Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq59 199 6e-45 seq122 129 8e-24 seq16 86.0 9e-11 >seq59 Length=149784 Score = 199 bits (220), Expect = 6e-45 Identities = 357/508 (70%), Gaps = 14/508 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||||||||| || || ||||| || |||||| | || | Sbjct 65240 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCGTCTTTCTGGACAGCAGAGGAGATTGATC 65298 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| | | |||||| |||||| | ||||| Sbjct 65299 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATTT 65358 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| |||||||| || || || || ||||||||| || Sbjct 65359 CCCACGTTCTCGC-TTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAG 65417 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | ||||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 65418 CGCTTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 65477 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | Sbjct 65478 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAA 65537 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | | || ||||||| |||||||| || | || | | | ||| ||||| Sbjct 65538 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGC 65596 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTT-GCCGAGCGGCTCG 1456188 ||||||||| | | ||||||| |||| | || ||| |||||| || |||| |||| Sbjct 65597 CGACTGGGCAGTTAGGTGGATC--CAAGACAAGGACTC--CACTTTCGCTCAGCGTCTCG 65652 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 | | ||| |||| ||| ||||| ||||| ||||| || ||| | |||| || |||| Sbjct 65653 TTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGC 65712 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | |||||||| || |||||| | || || Sbjct 65713 TGAAGAAGCGTGGTCTCATGGCTGGCCT 65740 Score = 91.5 bits (100), Expect = 2e-12 Identities = 149/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||| ||| |||||| ||||||| | | ||| | || || ||||| |||| Sbjct 65858 CGAGGCTGTCAGCATCGAGCAAGAGTTCCTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 65917 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 65918 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTGCTC 65975 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | |||||||||| ||| | |||||| || Sbjct 65976 TCCCTCGGTAACG-AGAAGTACTACAAGTCGGCCAACCCCTTCGACTTCATGGAGAACAT 66034 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 ||| | | || ||||||||||| |||||| Sbjct 66035 CTCCTTGGCAGGAAAGACCAACTTCTTCGAG 66065 >seq122 Length=96280 Score = 129 bits (142), Expect = 8e-24 Identities = 187/262 (71%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || |||||||| ||||| || || || | | ||| ||||| ||||| || | ||| Sbjct 6621 CCAACGCTCTTCAATGCTGGTACACCACAAGCCCAGCTGTCGTCCTGCTTCTTGGTCGAC 6562 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| ||||||||||| |||||| ||| || | ||||| Sbjct 6561 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCA 6502 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACA--CAAGG--TGCGCGCCGCGGGCGCCTA 260100 ||| | ||||| || ||||| || | ||| || | | || ||| | || || || Sbjct 6501 AAGACTGCCGGAGGTATCGGATT----GAACATCCATCGTATCCGTGCCACTGGTGCATA 6446 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || || |||||||| | || ||||| | || |||||||| ||||| || ||| | Sbjct 6445 CATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTGTTCAACAA 6386 Query 260161 CACGGCGCGCTACGTCGACCAG 260182 ||| ||| | ||||| |||||| Sbjct 6385 CACCGCGAGGTACGTTGACCAG 6364 Score = 111 bits (122), Expect = 2e-18 Identities = 357/544 (66%), Gaps = 24/544 (4%) Strand=Plus/Minus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAACTCGTTGCT 262937 |||||||||||| | || ||| | | || | ||||| || | |||||||| |||| Sbjct 5490 TGGGACTGGGACTCTCTCAAGGCC-CAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCT 5432 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 ||| || | ||||||||| || | || || ||||| || ||| || |||| ||||| Sbjct 5431 CGTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGCTTCGA 5372 Query 262998 GGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056 | ||| ||| ||||| ||| ||||||| || || | ||||| || || |||| Sbjct 5371 GC-CATACACCTCGAACATTTACTCGCGCCGTGTCCTGGCTGGCGAGTTCCAAGTCGTCA 5313 Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116 ||| | || ||||| | |||| | || |||||| | | || | ||| Sbjct 5312 ACCCCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTGTGGTCCGACAACATGAAGAACC 5253 Query 263117 GGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGAT 263175 | |||| || | || | || || | ||| | | | || | || |||| Sbjct 5252 GCATCATCGCAG-ACGGAGGTTCCATCCAGAACATCCCCAACA------TCCCCGCCGAC 5200 Query 263176 CTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATG 263232 | ||||| |||| ||||||||| |||||| | || | || ||||| | | ||| Sbjct 5199 ATTAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGC---ACCATCGTCCAGATG 5143 Query 263233 GCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGAC 263292 || || ||||| | ||| |||| ||| |||||| |||||| | || | ||| Sbjct 5142 GCCGCTGACCGTGGAGCCTTCATCGATCAGTCCCAGTCCCTCAACATCCACATGAAGGAC 5083 Query 263293 CCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAG 263349 || || || | ||| |||| || |||||| || ||| | |||||||||| Sbjct 5082 CCAACAATGGGCAAGA---TCACATCCATGCACTTTGCTGGCTGGAAACTCGGCCTCAAG 5026 Query 263350 ACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGAT 263409 || ||||||||||| || |||||| | |||| | | || ||||||||||||||| Sbjct 5025 ACCGGCATGTACTACCTCCGCACCATGGCCGCCTCGGCTCCTATCCAATTCACCGTCGAT 4966 Query 263410 CAGG 263413 |||| Sbjct 4965 CAGG 4962 >seq16 Length=230287 Score = 86.0 bits (94), Expect = 9e-11 Identities = 168/246 (68%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 ||||| || || ||| ||| | | | ||||| ||| ||| || || || || | | Sbjct 16206 ACCTTCTCCGCCTCGATAATTTGGAGTAGGCGCTTCACGACTTGTGCATCCGTCAGCCTC 16147 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 ||||||| | |||||| ||||| |||||||| |||||||| | | ||| ||| Sbjct 16146 GCAAAGCGTAAGATGGCGCAACGTGACTGCAGGGGCTCGATGATCTTGTTGGACTGATTG 16087 Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAGGGCCTG 332988 || || | || || || || || | | | |||||||| |||| | ||||| || Sbjct 16086 CATGCGAATGCGAAGCGGGTGGTCGAAGAGTAGATCTCCATGGTGCGAC-GCAGGGCTTG 16028 Query 332989 TTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTG 333048 |||||| | | ||| | || ||||||||||| || |||| | ||| ||||| || || Sbjct 16027 TTGGGCACCAGACGTCATGCTATCGGCCTCGTCAAGAATGACAAGCTTTTGGCGTCCTTG 15968 Query 333049 CGGCAG 333054 || || Sbjct 15967 GGGGAG 15962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177728637226672