Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 9e-23
seq168 111 2e-19
seq41 93.3 4e-14
>seq4
Length=289853
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||||| || || | ||| || ||||| ||||| || ||||||||||| |
Sbjct 37164 CCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 37223
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| ||||| || || |||| |||||||| || || ||
Sbjct 37224 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 37283
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | || |||||||| |||||
Sbjct 37284 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACC 37343
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || | || || ||||| ||||||||
Sbjct 37344 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 37390
>seq168
Length=66023
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| ||||||||||||||| | ||| || ||| || |||||
Sbjct 53579 GTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTG 53520
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || ||||||| |||||||| || || || ||||| || || || || || ||
Sbjct 53519 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 53460
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || ||| | ||||||||||| || || || | ||| ||||| || || ||
Sbjct 53459 CGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGT 53400
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| || |||||
Sbjct 53399 AAGGGTCTTGACGAAGATCTGCAT 53376
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || || || | ||| || ||||| || |||||||| ||
Sbjct 54058 CCACCACGGAGGCGGAGAACAAGATGCAACGTAGACTCCTTCTGGATGTTGTAATCAGAC 53999
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || ||||||| |||||||| || || ||
Sbjct 53998 AGGGTACGGCCATCTTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 53939
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || ||||| || | || || |||||||| ||
Sbjct 53938 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGATTCGACT 53879
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || || ||||| | || || ||||||||||||||
Sbjct 53878 TCCAGCGTAATTGTCTTTCCGGTAAGGGTCTTGACGAAAATTTGCAT 53832
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || || ||||| ||||||||||| || | |||| | || || | |||
Sbjct 53806 TGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCATCCTCCAACTGC 53747
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| |||| |||||||| || || || || || || || || ||||| ||
Sbjct 53746 TTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTC 53687
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||||| || | || || || |||||||| || || ||||| || || || ||
Sbjct 53686 GACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTA 53627
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| ||| || || ||||| |||||
Sbjct 53626 AGAGTCTTGACAAAAATCTGCAT 53604
>seq41
Length=173993
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| || ||| | || |||||||| ||||| ||||| |
Sbjct 152257 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 152316
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| || || || || || || || || ||||| || ||||| ||
Sbjct 152317 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACATTGT 152376
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | || ||||| || || || || || || ||||| || || || || || || ||||
Sbjct 152377 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 152436
Query 134704 A 134704
|
Sbjct 152437 A 152437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505392992237120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |