Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq59 132 7e-26 >seq59 Length=149784 Score = 132 bits (146), Expect = 7e-26 Identities = 368/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||||||| || || ||||| || | || | ||||| || || || || Sbjct 65798 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 65739 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||| ||| ||||||||||| || ||||| || |||| || || || || || ||||| Sbjct 65738 GCCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAA 65679 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792 ||| || || || || || || ||||| || | || || || | | || || || Sbjct 65678 GATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCTTGTCTTG 65619 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 |||||| | |||||| || || |||||||| | ||||| || || || || ||||| Sbjct 65618 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATT 65559 Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| | |||| || | | || || | ||||| || || | || || Sbjct 65558 GAAGAGGT-ATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 65500 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || | || ||||| || ||| || || || ||||| || || | ||||| | | Sbjct 65499 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 65440 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 |||| ||||| | || | || | || || || || ||||| ||| |||| Sbjct 65439 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGG 65380 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTG-TCAATTTATTCC 40088 | || || || | || || ||| || || |||||| | || || |||| Sbjct 65379 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCC 65320 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | | || || || | ||| | || || |||||||| || |||||||| |||| Sbjct 65319 AGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCCTCGGCCT 65260 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 65259 TCTTGTACATCTGCCAGAT 65241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686901450075840