Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq122 228 1e-54 seq59 125 9e-24 >seq122 Length=96280 Score = 228 bits (252), Expect = 1e-54 Identities = 1156/1811 (64%), Gaps = 45/1811 (2%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || ||||||| || || | ||||| || | Sbjct 5006 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGTTTCCA-GCCAGCAAAGTGCATGGATGT 5064 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | ||| |||| | || ||| Sbjct 5065 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT--GATCGATG 5122 Query 110480 AAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTG 110537 ||| || || | || ||||| | | || | | | | | || ||||| || | Sbjct 5123 AAGGCTCCACGGTCAGCGGCCATCTGGACGA--TGGTGCGCTGGGAGATCTCCCAGACGG 5180 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCG 110597 | ||||| ||| || || | ||||| | | ||| |||||||||||||| || | Sbjct 5181 TCTTGTAGAGGGCCTTAATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCTCC-G 5239 Query 110598 CCTTC-ACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTG 110656 || | | ||| | | |||||| | | |||||| ||||| || | | ||| ||| Sbjct 5240 TCTGCGATGATGCGGTTCTTCATGTTGTCGGACCACAGACCCATGTCGACCAAGTCCTTG 5299 Query 110657 A----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGAT 110712 | | ||| | ||||| | ||||| || || ||| | | | ||| || Sbjct 5300 AGCAACCAGGGG----TTGACGACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAAT 5355 Query 110713 GTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGT 110772 ||| | |||||||| || ||||| || || || | || || | |||||| || || Sbjct 5356 GTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGT 5415 Query 110773 TGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAG 110832 ||||| ||||| | | || ||| || | ||| | || |||||| | ||||||| Sbjct 5416 GGGCATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAG 5475 Query 110833 AACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCC 110891 | |||||||| | | | | || | || |||||||||| |||| ||| | | Sbjct 5476 AGAGTCCCAGTCCCACAGGTCGGTAGGGGTGACGC-CCCACATGTCGTACTGGAGCTCGC 5534 Query 110892 CTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCAC 110951 | | |||| | || || ||||| |||| || || | || ||| | |||| || Sbjct 5535 CCTTGGACACTGGTGATCCCTCGTAGGTCTCGTATGTGCCGTGGATCTGGGCCAGCTCCA 5594 Query 110952 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 111011 | || || | |||| || ||||| |||||||| | | || | ||||| Sbjct 5595 CGGAGGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTAAGGAACTTGG 5654 Query 111012 CTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 111071 | || ||||| || | |||| | ||| |||| || || || || |||| Sbjct 5655 CCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGGCCCTGGACAC 5714 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 111131 | | ||| || ||||| || | || || || | ||||| || | | Sbjct 5715 CAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGTCTGGCCTCCGGGACGGGGTAGTAGT 5774 Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 111191 | |||||||| ||| | || ||| |||| || ||||| || ||||| || | Sbjct 5775 TGACGTCAATGATCTTGTTCAAGTTCTTGACGACAACCTGTGTGACCTCGTGAAGCTTCT 5834 Query 111192 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251 | || | |||| | | | || || | || ||||| | || ||||| | Sbjct 5835 GGAAGTCGTATGTGCCGTTGGCCATGTCAACGTATGTAGGCAGGGCAAGAGACGCCAAGT 5894 Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311 | || || ||| |||||| | | |||||| | ||| ||||| || | |||||| | Sbjct 5895 TACACACGGCCACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTTGGAGC 5954 Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371 | || || || | ||||| ||||| ||||| |||||| ||||||||||| | || Sbjct 5955 TGCGGATGGTACCTAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACA 6014 Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCT 111430 || | || | || ||||| ||||| || | |||||| | | ||||| | || | | || Sbjct 6015 TGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCT 6074 Query 111431 GGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 | |||| ||| ||| | |||||| |||||| |||||| || |||||| Sbjct 6075 TG----ATGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCAAAC 6130 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 111546 || || || |||| | | || || || || || || || | || | ||| | Sbjct 6131 TCATCGCCGTAAACGTCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCCAGTC 6189 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 || | |||||| ||||||||||| || || || ||||| || | | || | || Sbjct 6190 GCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCATAGAACAAGTC 6249 Query 111607 TCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665 | ||| || | || || | || ||||| || | || |||||||| | || || Sbjct 6250 ACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAAGACAT 6308 Query 111666 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 111721 |||||||||||||||| | |||| |||| || || | | | ||| | | || Sbjct 6309 CCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCC-ACCCTGG 6367 Query 111722 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 111781 | || || | ||| ||| ||| || ||||| ||||| |||| ||||| | || | Sbjct 6368 TCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATACCGTTCGAGTTT 6427 Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 111841 || || || || ||| | | |||| | | | |||||||| || || ||| Sbjct 6428 CCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCGATA 6487 Query 111842 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901 || || || ||||||||| |||||| | | || || |||||||||| | || Sbjct 6488 CCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTCAATA 6547 Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961 |||||||| || ||| | |||||| |||| ||| | | ||||||||||||| Sbjct 6548 CTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGTGGTGTACCAGCA 6607 Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGTCT 112019 |||||||| ||||| | ||||| |||| || |||| ||||| || |||||||| Sbjct 6608 TTGAAGAGCGTTGGGGAGGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTCT 6665 Query 112020 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACT 112079 | | ||||| || || ||||| ||||| | || || ||||| | ||||| || Sbjct 6666 CGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACGGCAACACGCATAATCATGTGCT 6725 Query 112080 GTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTG 112138 |||| | || | ||||||| || || |||| || | || |||||| || ||| Sbjct 6726 GTGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGGTACGATC-GCTCAAGAGTCTTG 6784 Query 112139 AGACCAAAGTA 112149 | || ||||| Sbjct 6785 AAGCCGAAGTA 6795 >seq59 Length=149784 Score = 125 bits (138), Expect = 9e-24 Identities = 339/510 (66%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || ||||| || || || || |||||| || || | ||||||||| Sbjct 65783 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGACC 65724 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||| ||| |||| | | ||| || |||||||||||||||||||| || Sbjct 65723 ACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 65664 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTG 122848 || || |||| || || | ||||| | | ||| | ||| | | | ||| | | || Sbjct 65663 GGCGAAGGCAACGAGACGCTGAGCGAAAGTG-GAGTCCTTGTCTTGGATCCACCTAACTG 65605 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 122908 |||| | |||||||||| || || || | || | |||||| | || | | | Sbjct 65604 CCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 65545 Query 122909 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 122968 || || | ||||| |||||| |||| || | || ||||| ||| | |||| Sbjct 65544 GTTGAGCTTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 65485 Query 122969 TTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCC 123027 | || || || | ||| | ||||||| |||| ||||| || || ||||| | Sbjct 65484 TCTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 65427 Query 123028 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAG 123086 || || | | || ||||| |||||||| || ||| | || ||||| || || Sbjct 65426 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAG 65367 Query 123087 GATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATC 123143 | || ||||| | |||| || || | || | |||||||||| ||| || Sbjct 65366 AACGTGGGAAATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTGAAGGTC 65307 Query 123144 TTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 65306 CTTGGAGAGATCAATCTCCTCTGCTGTCCA 65277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025280057600