Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq122 232 7e-56 >seq122 Length=96280 Score = 232 bits (256), Expect = 7e-56 Identities = 524/780 (67%), Gaps = 22/780 (3%) Strand=Plus/Minus Query 53170 TGGTGAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTA 53229 || ||||| ||| ||| | | | ||||| || ||| |||| || |||||||| || || Sbjct 6739 TGCTGAGAGGCCACAGCACATGATTATGCGTGTTGCCGTGGGCATTCACGGTGAGGA-TA 6681 Query 53230 CACGCGTGTCCGT-GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCAC 53286 | | | ||||| ||| || | ||| ||||| ||||| || |||||| | Sbjct 6680 TTGAGAAGACAATCGAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCCTC 6623 Query 53287 GCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGC 53346 ||||| || ||||| |||||||| || | ||| ||||| ||||||| |||| | Sbjct 6622 CCCAACGCTCTTCAATGCTGGTACACCACAAGCCCAGCTGTCGTCCTGCTTCTTGGTCGA 6563 Query 53347 GATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTC 53406 |||||||| || || || || ||||| || || |||||| ||||||| ||||| Sbjct 6562 CATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTC 6503 Query 53407 CAAGTGGTCGGGTGGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCA 53464 ||| | || |||||||| | || | ||| | ||||||| | || || Sbjct 6502 AAAGACTGCCGGAGGTATCGGATTGAACATCCATCGTA--TCCGTGCCACTGGTGCATAC 6445 Query 53465 ATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAAC 53524 || || || ||||| | | | || ||||| || ||||||||||| ||||||||| Sbjct 6444 ATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTGTTCAACAAC 6385 Query 53525 ACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTC 53584 || || ||||||| |||||||||| |||||| || | |||||||||||| || Sbjct 6384 ACCGCGAGGTACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTC 6325 Query 53585 GAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAA 53644 ||||| |||||||| || | | ||||| || || ||| | ||| || || | || Sbjct 6324 GAGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACCTGAGAAAGAACCACGGCAAGGAG 6265 Query 53645 GAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAG 53704 || | || ||||||| |||| ||||| ||||| ||||| ||||||||| | Sbjct 6264 GAAGTCCGTGCCCGTGACTTGTTCTATGCTCTCTGGATCCCGGATCTCTTCATGAAGCGT 6205 Query 53705 GTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGT 53764 || |||||| ||| || ||| ||| |||||||| ||||| ||||| || | | Sbjct 6204 GTTGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGAC 6145 Query 53765 GTCTACGGTGAGGAGTTTAACGAGATGTA-TCGGAC-----GTACGCAGTTCAGGGCCGC 53818 || ||||| || |||||| | | | | || || | | | | | | |||| ||| Sbjct 6144 GTTTACGGCGATGAGTTTGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGC 6085 Query 53819 TACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAG 53878 |||| ||||||| | || | ||| | | || ||| || ||| ||| Sbjct 6084 ------AAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAG 6031 Query 53879 ACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 || |||| || | ||||| ||||||||| | |||| |||||||||||||||||| Sbjct 6030 ACAGGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 5971 Score = 104 bits (114), Expect = 3e-17 Identities = 299/450 (66%), Gaps = 15/450 (3%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||||||||| || || ||||| || || || || | ||||| | ||| | Sbjct 5445 CGCAACTCCCTGCTCGTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTC 5386 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| | ||||| ||| |||||| ||| || || ||| Sbjct 5385 AACGAGTGCTTCGAGCCATACACCTCGAACATTTACTCGCGCCGTGTCCTGGCTGGCGAG 5326 Query 55604 TTTGTCATGATCAACAAGCACCTCGT----CAAGGACCTGCAGAAGATCAACAAGTGGAA 55659 || || | || ||| | ||| || ||||||| || | || |||| Sbjct 5325 TTC--CAAG-TCGTCAACC-CCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTGTGGTC 5270 Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGA 55715 | | || |||| || || | || || ||| || ||| ||||||| || | Sbjct 5269 CGACAACATGAAGAACCGCATCATC-GCAGA-CGGAGGTTCCATCCAGAACATCCCCAAC 5212 Query 55716 TTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774 ||| | || | | |||| | ||| ||| || |||||||| | ||| | | Sbjct 5211 ATCCCCGCCGACATTAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGCACCATC 5152 Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTC 55834 | | ||| ||||| ||||| || | |||||| ||||||||||| || |||||| | Sbjct 5151 GTCCAGATGGCCGCTGACCGTGGAGCCTTCATCGATCAGTCCCAGTCCCTCAACATCCAC 5092 Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGA 55894 ||| || | || || ||| |||| | | || ||||||||| || ||||| || Sbjct 5091 ATGAAGGACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAACTCGGC 5032 Query 55895 CTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| || |||||||| || || ||| Sbjct 5031 CTCAAGACCGGCATGTACTACCTCCGCACC 5002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547210144788800