Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq122 275 7e-69 seq168 188 8e-43 seq4 167 3e-36 seq41 149 7e-31 seq59 98.7 1e-15 >seq122 Length=96280 Score = 275 bits (304), Expect = 7e-69 Identities = 929/1424 (65%), Gaps = 36/1424 (3%) Strand=Plus/Plus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || || ||| || ||| || | ||| | ||||| ||||| || |||| Sbjct 5324 AACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTCGAGGTGTATGGCTCGAAGCACTCG 5383 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 ||| ||||| ||||| | ||| || || ||||| || | || | ||| || || Sbjct 5384 TTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATGGGTGCAACGAGCAGGGAGTTG 5443 Query 80476 CGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATCAACCCCA 80529 || | ||||||| |||||| | ||| | | | || | ||| | || | Sbjct 5444 CGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGT---A 5500 Query 80530 ACGCTGTGACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAAC 80589 | || ||||||||||||| ||| | ||||| ||| | || || ||| || | Sbjct 5501 GGGGTGACGCCCCACATGTCGTACTGGAGCTCGCCCTTGGACACTGGTGATCCCTCGTAG 5560 Query 80590 GTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCA-TAAGGGCCGCGTGATA 80648 |||||||| | ||| | ||| ||||||||| |||| || | | || |||| || Sbjct 5561 GTCTCGTATGTGCCGTGGATCTGGGCCAGCTC-CACGGAGGCAGTCAAAGCACCGTGGTA 5619 Query 80649 AATGCACTCAAAGACGCCCTTGTTCAC-ACCGCGCGCCTGTGGGTCGTCGAACGACAAGC 80707 ||| |||||||| ||| | | | | |||| || ||||| | | || Sbjct 5620 GATGGTCTCAAAGATCTGGGAGTTAAGGAACTTG-GCCTCGGGAGAATCGAAGGGAAGGC 5678 Query 80708 CCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCT 80767 | || ||| | ||||| |||||||| || || | ||| | || | ||| || Sbjct 5679 GGAGAGCCAGGAATGCATCAGCAAGGCCCTGGACACCAACGGCAACTGGCCTGTGACGGA 5738 Query 80768 TGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGT 80827 ||| || ||||||||| | ||||| |||| || |||| ||||| || Sbjct 5739 AGTTGCTGCGTCTGGCCTCCGGGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAGT 5798 Query 80828 TGCGTGTA-ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT-TG--GTTCCCC 80883 | | || |||||| |||| || || ||||| ||||| |||||| || || ||| || Sbjct 5799 T-CTTGACGACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCC 5857 Query 80884 TTCACAA---ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCA 80940 | ||| ||| || ||| || ||||||| || |||||||||||||| || | Sbjct 5858 ATGTCAACGTATGTAGGCAGGGCAAGAGACGCCAAGTTACACACGGCCACCTCATCTGGG 5917 Query 80941 TCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTC 81000 | | ||||||| || || ||||||| || || || ||||| ||||| ||| Sbjct 5918 GCAGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCTAGGTTCTTC 5977 Query 81001 TGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACC 81060 ||||| |||| ||||||||| |||||||| ||||| | ||| | || ||||| | Sbjct 5978 TGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTC 6037 Query 81061 TGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCT 81120 || |||| ||| |||| || ||||| || | ||||||| |||||| || || Sbjct 6038 TGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTACCC 6097 Query 81121 TCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTC 81179 || | | || |||| ||| | || |||| | |||| || || | | | Sbjct 6098 TCCTTCTCGTAGCCCTCGTAGAGC-GCCTCAAACTCATCGCCGTAAACGTCTGCCAATCC 6156 Query 81180 TGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAA 81239 ||||| ||||| |||||||| ||| ||||||| || ||||| ||| ||||||||| Sbjct 6157 AGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAA 6216 Query 81240 AGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTG 81299 || ||||||||||| || ||||| ||| ||| || | ||||| | || || Sbjct 6217 GAGATCCGGGATCCAGAGAGCATAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTG 6276 Query 81300 GTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGC 81359 ||| | || || || || || | || ||||| ||||||||||| | || | ||| Sbjct 6277 GTTCTTTCTCAGGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGC 6336 Query 81360 GATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416 || | || ||| ||||||||||| ||||| | || || ||| || || Sbjct 6337 GAAAGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAACAC 6396 Query 81417 ACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTT 81476 || | ||| || | |||||| | || | ||||| ||||| | || | || | Sbjct 6397 GCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGT 6456 Query 81477 GGCGCG--CACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534 ||| || || || ||| | ||||| || || | |||||| ||| ||| Sbjct 6457 GGCACGGATACGATG--GATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCA 6514 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594 ||| || | || ||||| || ||||| || ||||| | |||||||| | |||||| Sbjct 6515 CACGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAG 6574 Query 81595 CAGCTTGACATCTGAGGGCTTTT--TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 ||| |||| || |||||| | || || |||||||| || ||||||| ||||| Sbjct 6575 CAGGACGACAGCT--GGGCTTGTGGTGTACCAGCATTGAAGAGCGTTGGGGAGGCGTGTG 6632 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCG 81711 |||| || | ||||| |||| || || || ||| | | |||||| |||||| Sbjct 6633 TGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCT-CAATATCCTCACCG 6691 Query 81712 TGAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 ||||| || | || |||||||||| ||||| ||| ||| |||| Sbjct 6692 TGAATGCCCACGGCAACACGCATAATCATGTGCTGTGGCCTCTC 6735 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| ||||||||||| |||||||| | |||||| || Sbjct 5003 GTGCGGAGGTAGTACATGCCGGTCTTGAGGCCGAGTTTCCAGCCAGCAAAGTGCATGGAT 5062 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||| |||| || |||| |||||| || ||||| |||||| |||| Sbjct 5063 GTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG 5122 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || ||||| || || ||||| Sbjct 5123 AAGGCTCCACGGTCAGCGGCCAT 5145 >seq168 Length=66023 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| |||||||| ||||| |||||||| || ||| | Sbjct 53604 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCT 53663 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||| | || ||||||||||||||||| |||||||| |||||| Sbjct 53664 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 53723 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||||||||| | ||||||| || ||||| | || || || Sbjct 53724 CAGCGCCTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACCCTGTCGGATTACAAC 53783 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || ||| | || | |||||||| ||||| Sbjct 53784 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCTCCGTCTTCGTGGTGG 53830 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| |||||||| || ||| | ||||||||||| Sbjct 53376 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 53435 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| | || || |||||||||||||| |||||||| |||||| Sbjct 53436 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 53495 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| || ||||| | ||| || || | ||||| || Sbjct 53496 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 53555 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || |||||||| | ||| | |||||||| ||||| Sbjct 53556 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGG 53602 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| |||||||| ||||| ||||| || || || || || Sbjct 53832 ATGCAAATTTTCGTCAAGACCCTTACCGGAAAGACAATTACGCTGGAAGTCGAATCGTCG 53891 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || || || || |||||||| || || || |||||| Sbjct 53892 GATACCATCGATAACGTCAAGTCCAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 53951 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| || || |||| |||||||| | || || || Sbjct 53952 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAAGATGGCCGTACCCTGTCTGATTACAAC 54011 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | ||||| || | || || || ||||| Sbjct 54012 ATCCAGAAGGAGTCTACGTTGCATCTTGTTCTCCGCCTCCGTGGTGG 54058 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||| ||||| ||||| ||| | || | ||| Sbjct 53172 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCTGATACCATCGACAACGTTAAGAGC 53231 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||||||||||||||| || |||||||| ||||| || || || || ||| Sbjct 53232 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 53291 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||| | || ||||| | ||||| || |||| ||||| || || || || Sbjct 53292 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 53351 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||| || ||||| Sbjct 53352 TTGGTCCTCCGTCTGCGTGGTGG 53374 >seq4 Length=289853 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || ||||||||||| || |||||||| ||||| Sbjct 37390 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 37331 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||| | || || |||||||||||||||||||| || |||||| Sbjct 37330 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 37271 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 37270 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 37211 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| | ||| || | || || || || Sbjct 37210 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTCCGTGGAGG 37164 >seq41 Length=173993 Score = 149 bits (164), Expect = 7e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| | || |||||||| || || |||||||| ||||| |||| || Sbjct 152438 CTTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTAT 152379 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || |||||||||||||||||||||||||| ||||||||||| || Sbjct 152378 CGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCT 152319 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| |||||||||| || || || | ||||| || |||| || Sbjct 152318 GATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 152259 Query 27594 GG 27595 || Sbjct 152258 GG 152257 >seq59 Length=149784 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 64713 TCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTC 64772 ||||||||||| || || ||| || || || || ||||| || || || ||| || Sbjct 65642 TCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTC 65701 Query 64773 TATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832 ||||||||||| || ||||| || || ||| | || ||| | || || |||||||| || Sbjct 65702 CATTTTCTGGCTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCAT 65761 Query 64833 CTCTCGGGACGAGGGGCTCCAC 64854 ||| || |||||||| |||||| Sbjct 65762 CTCCCGTGACGAGGGTCTCCAC 65783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304297678720