Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq168 140 3e-28 >seq168 Length=66023 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || |||||| | ||||| ||||| |||||| | || Sbjct 53604 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCT 53663 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || ||||| ||||| || || || || || || || Sbjct 53664 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 53723 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || ||||| || | ||| | || ||||||||| Sbjct 53724 CAGCGCCTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACCCTGTCGGATTACAAC 53783 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | ||||||||| | ||| | || ||||| || Sbjct 53784 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCTCCGTCTTCGTGGTGGTAT 53833 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||| | || || || ||||| Sbjct 53376 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 53435 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || ||||| || || || || Sbjct 53436 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 53495 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || ||| || || | ||||| |||||| Sbjct 53496 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 53555 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 53556 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTAT 53605 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||| ||| | ||||| || ||||| ||| |||| Sbjct 53832 ATGCAAATTTTCGTCAAGACCCTTACCGGAAAGACAATTACGCTGGAAGTCGAATCGTCG 53891 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || ||||| || || ||||| ||||| || || Sbjct 53892 GATACCATCGATAACGTCAAGTCCAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 53951 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | ||||| | ||| | || ||||||||| Sbjct 53952 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAAGATGGCCGTACCCTGTCTGATTACAAC 54011 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || || ||| | ||| | || | || ||||| || Sbjct 54012 ATCCAGAAGGAGTCTACGTTGCATCTTGTTCTCCGCCTCCGTGGTGGTAT 54061 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 |||| |||||| | || || ||||| || || |||| || | || || | || || Sbjct 53170 TGACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCTGATACCATCGACAACGTTAAGA 53229 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || |||||||| || || || || || || || || ||| | || | |||||||| Sbjct 53230 GCAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCA 53289 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | ||| | || ||| | ||| | ||||| |||||||| || |||||||||||| | | Sbjct 53290 AGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCC 53349 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | ||||| | ||| |||| ||||| || Sbjct 53350 ACTTGGTCCTCCGTCTGCGTGGTGGTAT 53377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434913746373120