Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4 165 8e-36 seq168 161 9e-35 seq41 116 3e-21 >seq4 Length=289853 Score = 165 bits (182), Expect = 8e-36 Identities = 165/212 (78%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| ||||| || |||||||| |||| ||| Sbjct 37182 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 37241 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||||||||| ||||||| ||||| | |||||||||| | Sbjct 37242 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 37301 Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| || | || | ||| ||| |||||||||||| | || || || | Sbjct 37302 ATCTTGGACTTGACATTGTCG--ATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCT 37359 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||||||| ||||| ||||| || |||||| Sbjct 37360 TGCCCGTCAGGGTCTTCACGAAGATTTGCATG 37391 >seq168 Length=66023 Score = 161 bits (178), Expect = 9e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||||||||| ||||||||| Sbjct 53602 CCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 53543 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||| ||||| ||||||||||| ||||||| ||| Sbjct 53542 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 53483 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| || | | | |||||| |||||| || Sbjct 53482 ATGCCCTCCTTGTCCTGGATCTTCGACTTC-ACATTGTCGATGGTGTCGGACGACTCAAC 53424 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 53423 CTCCAAAGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 53376 Score = 131 bits (144), Expect = 2e-25 Identities = 171/232 (74%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||||| || ||||||||||||||| || || || Sbjct 53830 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGAC 53771 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || | |||||| || || || ||||||||||| ||||||| ||| Sbjct 53770 AGGGTGCGGCCATCCTCCAACTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 53711 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACA-CA---GTGTCGCTCGACT 41810 | | |||||||||| ||| | || | ||| |||| | || || || || | Sbjct 53710 ATACCCTCCTTGTCC-TGAATCTTCGACTT----GACGTTATCAATGGTATCAGATGATT 53656 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| | ||| ||||| || ||||| || ||||| || ||||||||||| Sbjct 53655 CCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 53604 Score = 116 bits (128), Expect = 3e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||||||| Sbjct 53374 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 53315 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || || |||||||||||||| ||||| || || ||||||| |||| Sbjct 53314 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 53255 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||| |||| | | | || || |||||| || Sbjct 53254 ATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGTTGTCGATGGTATCAGACGACTCGAC 53196 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || || || || || |||| Sbjct 53195 CTCAAGGGTGATGGTCTTGCCAGTCA 53170 Score = 113 bits (124), Expect = 4e-20 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||||| ||| ||||||||| ||||| || || || Sbjct 54058 CCACCACGGAGGCGGAGAACAAGATGCAACGTAGACTCCTTCTGGATGTTGTAATCAGAC 53999 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||| ||||| ||||||||||| ||||||| || Sbjct 53998 AGGGTACGGCCATCTTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 53939 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | || |||||| || ||| || ||| | | | ||| | || || ||| | Sbjct 53938 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATG-----GTATCCGACGATT 53884 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| ||| || || || || || || ||||| |||||||| ||||| Sbjct 53883 CGACTTCCAGCGTAATTGTCTTTCCGGTAAGGGTCTTGACGAAAATTTGCAT 53832 >seq41 Length=173993 Score = 116 bits (128), Expect = 3e-21 Identities = 139/184 (76%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| || ||||| | || |||||||||||||| || || | Sbjct 152257 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 152316 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACG 41789 |||||||||| ||||||| |||| | |||||||||| ||| | || | ||| || | Sbjct 152317 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCC-TGAATCTTCGACTTGACATTG 152375 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 || | ||| ||| ||||| ||||| | || || || || ||||||| ||||| | Sbjct 152376 TCG--ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGA 152433 Query 41850 CGAA 41853 |||| Sbjct 152434 CGAA 152437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462299053347200