Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3051 102 2e-16 seq2301 93.3 9e-14 >seq3051 Length=56537 Score = 102 bits (112), Expect = 2e-16 Identities = 309/472 (65%), Gaps = 14/472 (3%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 ||||| |||||||||| |||| | |||||| ||||| | || ||||| ||| Sbjct 42943 TTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 43002 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | |||| || ||||| ||| || | ||| ||||||| | || |||||| Sbjct 43003 GCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAG 43062 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351 ||||| || || ||||||||||| || | | |||| | || | | || | || Sbjct 43063 CTCATCTCCCGTGATGAGGGTCTCCA-CACCGACTTCGCCTGCCTCCTCTTCTCCCACCT 43121 Query 230352 C-----CAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406 | | ||||| | || | | ||| || | ||||||| || || || Sbjct 43122 TAGACACCGCCCAAGCAAGCA-----GGCCGTCCAAGACGTCATTACCGAGGCTGTCAGC 43176 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466 | ||| | |||||| | ||| || |||| ||| || | ||||||||||| || Sbjct 43177 ATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGC-CAA 43235 Query 230467 CTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 ||| ||| || ||||| || ||||| |||||| | | | | | || ||| |||| Sbjct 43236 CTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGA 43295 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| ||||| || | ||||| || | || |||||| ||| || || ||| || Sbjct 43296 GAAGTACTACAAGTCGACCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAA 43355 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||||| ||||| ||| ||||| || | | ||||||| ||| Sbjct 43356 GACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 43407 >seq2301 Length=34292 Score = 93.3 bits (102), Expect = 9e-14 Identities = 200/299 (67%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428 |||| |||||||||| | || || || ||| |||||||||| || || |||||| Sbjct 3916 AGGGTGTAGTAACTCTTGGCCTCTGGCTTCTGCTTGACGAACTCGGCCAAGTTGCCCTTG 3857 Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488 || ||||| || ||||| ||| ||| ||||| || | |||||| Sbjct 3856 TAGCAGGCGAGCTTCTTTCCGGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 3797 Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548 || ||||||||||| || || |||| | | | | || | || | ||||||| || Sbjct 3796 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGGGTCTTCAGGTAATCC 3737 Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608 | |||| | ||||| | ||| | || ||||| || ||||| ||||| || | Sbjct 3736 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 3677 Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | || |||| | ||| || | ||||||||||| ||||| ||||| || ||||| || Sbjct 3676 TCAGCCTTCATCAACATAGCTCTAGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 3618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057781727038970