Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3051 102 2e-16
seq2301 93.3 9e-14
>seq3051
Length=56537
Score = 102 bits (112), Expect = 2e-16
Identities = 309/472 (65%), Gaps = 14/472 (3%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
||||| |||||||||| |||| | |||||| ||||| | || ||||| |||
Sbjct 42943 TTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 43002
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| |||| || ||||| ||| || | ||| ||||||| | || ||||||
Sbjct 43003 GCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAG 43062
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351
||||| || || ||||||||||| || | | |||| | || | | || | ||
Sbjct 43063 CTCATCTCCCGTGATGAGGGTCTCCA-CACCGACTTCGCCTGCCTCCTCTTCTCCCACCT 43121
Query 230352 C-----CAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406
| | ||||| | || | | ||| || | ||||||| || || ||
Sbjct 43122 TAGACACCGCCCAAGCAAGCA-----GGCCGTCCAAGACGTCATTACCGAGGCTGTCAGC 43176
Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466
| ||| | |||||| | ||| || |||| ||| || | ||||||||||| ||
Sbjct 43177 ATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGC-CAA 43235
Query 230467 CTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525
||| ||| || ||||| || ||||| |||||| | | | | | || ||| ||||
Sbjct 43236 CTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGA 43295
Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585
||| ||||| || | ||||| || | || |||||| ||| || || ||| ||
Sbjct 43296 GAAGTACTACAAGTCGACCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAA 43355
Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||||||||| ||||| ||| ||||| || | | ||||||| |||
Sbjct 43356 GACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 43407
>seq2301
Length=34292
Score = 93.3 bits (102), Expect = 9e-14
Identities = 200/299 (67%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428
|||| |||||||||| | || || || ||| |||||||||| || || ||||||
Sbjct 3916 AGGGTGTAGTAACTCTTGGCCTCTGGCTTCTGCTTGACGAACTCGGCCAAGTTGCCCTTG 3857
Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488
|| ||||| || ||||| ||| ||| ||||| || | ||||||
Sbjct 3856 TAGCAGGCGAGCTTCTTTCCGGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 3797
Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548
|| ||||||||||| || || |||| | | | | || | || | ||||||| ||
Sbjct 3796 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGGGTCTTCAGGTAATCC 3737
Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608
| |||| | ||||| | ||| | || ||||| || ||||| ||||| || |
Sbjct 3736 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 3677
Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
| || |||| | ||| || | ||||||||||| ||||| ||||| || ||||| ||
Sbjct 3676 TCAGCCTTCATCAACATAGCTCTAGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 3618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057781727038970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |