Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2358 104 2e-17 seq2289 104 2e-17 seq2629 84.2 2e-11 >seq2358 Length=47611 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || || |||| || | ||||||||||| || ||||| || |||| Sbjct 17966 CCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 18025 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || || | |||||||||| ||| Sbjct 18026 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 18085 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| |||||| | |||| Sbjct 18086 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACC 18145 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || |||||||| || | || || || || |||||||| Sbjct 18146 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18192 >seq2289 Length=32595 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||||| || ||||||||||||||||| ||||||| | Sbjct 1418 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 1477 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| || || ||| | || || | |||||||||| || Sbjct 1478 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1537 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | | |||||| | ||| Sbjct 1538 ATTCCCTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACC 1597 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| ||||| || || | || |||||||| || ||||| Sbjct 1598 TCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||| |||||||| |||||||| ||||| | || || | ||||| Sbjct 1661 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCC 1720 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| |||||||| |||| || | |||||||||| || | ||| |||||||| Sbjct 1721 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 1780 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | ||| || || | ||| |||| || |||||| Sbjct 1781 TGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 1840 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || ||||| || || ||||| Sbjct 1841 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872 >seq2629 Length=50867 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045 |||| || ||||| ||||| | || || | | ||||| ||||| ||||| ||| | | Sbjct 38005 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 38064 Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105 | || | |||||||||| ||| | || |||||||| |||||| || || | | Sbjct 38065 TCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 38124 Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165 ||| |||||| || ||| || | ||| ||||||||||| || || || ||||| | Sbjct 38125 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 38184 Query 21166 A 21166 | Sbjct 38185 A 38185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422243148740204