Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3051 318 6e-82 seq2289 127 2e-24 seq2358 118 1e-21 seq2629 105 7e-18 >seq3051 Length=56537 Score = 318 bits (352), Expect = 6e-82 Identities = 562/812 (69%), Gaps = 23/812 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || || || |||||||| | |||||| | || || Sbjct 42547 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 42606 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | || || | |||||| | |||||| Sbjct 42607 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 42666 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || |||||||| ||||| || ||||||||||| || ||||||| Sbjct 42667 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 42726 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| ||||| ||| | | || || || ||||||||||| || || ||| || Sbjct 42727 TTCAG-CAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 42785 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT------GC--GC 116923 |||||| | ||| | || | || || |||||||||||| ||| | || || Sbjct 42786 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGC 42845 Query 116924 TCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983 || |||| | ||| || || ||||||||||| || || ||| |||| || Sbjct 42846 TCAACGGACAT--ACCTC------TTCAATGCCATCGAGACCATTCCTTGCATCAAGAAG 42897 Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 |||||||| ||||| | | |||||| | | || | |||| | |||| || Sbjct 42898 AAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTC 42957 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || |||||||| || || ||||| ||||||| || ||| |||||| |||| || ||| Sbjct 42958 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGG 43017 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 |||||||| || ||||||||| | |||||||| ||| ||||||||||||||| | || Sbjct 43018 CTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGAT 43077 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 |||||||| || |||||| ||||| | || ||| || | || || || ||| Sbjct 43078 GAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTCCCACCTTAGACACCGCCCAAGC 43137 Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283 | | |||| || || | ||||| || ||| ||||||||| ||| | || Sbjct 43138 AAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACT 43197 Query 117284 GAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGA 117342 || || | | || ||||| ||||| || | || | | |||| ||||||||| || Sbjct 43198 GAGGCACTTCCCTGTGCG-CTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 43256 Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402 ||||||||||||||||||||||||| || | || ||| ||||||| || |||| Sbjct 43257 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAA 43316 Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | || || ||| | ||||||| ||| Sbjct 43317 CCCATTCGATTTCATGGAGAACATCTCCCTGG 43348 >seq2289 Length=32595 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| |||||||| | || || || | || Sbjct 1872 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 1813 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| |||||||| || |||||||| Sbjct 1812 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 1753 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||||||||| ||||| || |||| ||||| ||| |||||||||| Sbjct 1752 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAAC 1693 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| | || || || Sbjct 1692 ATTCAGAAGGAGTCGACTCTTCA 1670 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || || || | || ||||| | | Sbjct 1416 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1357 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | || || ||||||||||| ||||||| Sbjct 1356 GATACCATCGATAACG-TCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 1298 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||| ||||| || || | |||||||| |||||||| Sbjct 1297 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGACTACAA 1238 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| ||||| || Sbjct 1237 CATCCAGAAGGAGTCTACGCTACATCTTGT 1208 Score = 120 bits (132), Expect = 3e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| | || ||||| | |||| | | | | |||| | ||| Sbjct 2076 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACCATCGACAACGTT-AAGAG 2018 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||| || ||| ||||||||||||| || |||| ||| ||||| Sbjct 2017 CAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 1958 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || |||| ||||||||| |||||||||||||||||||||| | || || || Sbjct 1957 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 1898 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||| || |||| || || | | Sbjct 1188 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 1129 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || ||||| ||||| ||||||| Sbjct 1128 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 1070 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||| ||||| || || | | | || || | ||||||||| Sbjct 1069 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAA 1010 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||||| || Sbjct 1009 CATCCAGAAGGAGAGCACGCTTCA 986 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || ||||| || || || || | || || ||| | | Sbjct 1644 ATGCAGATTTTTGTCAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCT 1585 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| ||||| ||||| || || ||||||| Sbjct 1584 GATACCATTGATAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCA 1526 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || |||||||| || | ||||| || |||||||| Sbjct 1525 GCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAA 1466 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||| || |||||| | || |||||| Sbjct 1465 CATTCAAAAGGAGTCGACCCTGCAT 1441 >seq2358 Length=47611 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || |||||||| || |||||| | || || || | || Sbjct 18192 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 18133 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | ||||| || || | ||||| ||||| || ||| |||||||| Sbjct 18132 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 18073 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | |||||||| || |||||| Sbjct 18072 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 18013 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 18012 ATCCAGAAGGAGTCCACCCTTCA 17990 >seq2629 Length=50867 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | |||||||| ||||||||| | || ||||| || |||| | | Sbjct 38185 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 38126 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || ||| |||||||||| || || Sbjct 38125 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTG 38066 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||||| || || | ||||| || ||||||||||||||||||| Sbjct 38065 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 38006 Query 40879 G 40879 | Sbjct 38005 G 38005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515199112891440