Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 120 3e-22
seq2358 113 4e-20
seq2629 89.7 4e-13
>seq2289
Length=32595
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || ||||| |||||||||||||| || || |||||| ||||||
Sbjct 1436 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCC 1495
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| |||| || |||||||| || ||||| || ||||||||||| |
Sbjct 1496 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGA 1555
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | ||| || | || | || ||||| | || | ||| ||
Sbjct 1556 ATCTTCGACTTGACGTTATCAATGGTATCAGATGAT-TCCACCTCAAGCGTAATCGTCTT 1614
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || ||||||||||||||
Sbjct 1615 TCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || ||||||||||| ||| | |||||| ||||||
Sbjct 1664 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 1723
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| | || || |||||||| || ||||| ||||||||||||||
Sbjct 1724 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1783
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||| ||||| | || | || |||
Sbjct 1784 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 1843
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || ||||||||
Sbjct 1844 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1872
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||| || || |||||||| ||||||| || | | ||||||
Sbjct 979 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 1038
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| | || || |||||||| || || || || |||||||| ||
Sbjct 1039 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 1098
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | |||||||| ||| ||||||| || | || ||
Sbjct 1099 AATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTT 1158
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || || || |||||||||||
Sbjct 1159 TCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || |||||||| || || ||||| |||||||||||| || ||
Sbjct 1220 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCC 1279
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || |||||||| || || || ||||||||||| ||| || || ||
Sbjct 1280 GCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTG 1339
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| |||| |||||| || | || | || || ||||| |||||
Sbjct 1340 ACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTC 1399
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 1400 TTGACGAAGATTTGCAT 1416
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| ||| | ||||| |||||
Sbjct 1892 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 1951
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || || ||| |||| ||||| ||||| || || || || ||||||||||||
Sbjct 1952 AGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 2011
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| ||| || | ||||||||| | ||| | || |||
Sbjct 2012 ATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTG 2071
Query 118710 CCGGTCA 118716
|| ||||
Sbjct 2072 CCAGTCA 2078
>seq2358
Length=47611
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|||||| || | ||||| |||||||| | || ||||| || || |||||||||||
Sbjct 17965 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 18024
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||||| |||||||||||| || || ||| |||| || |||||||| || || ||
Sbjct 18025 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 18084
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || || || || | |||| || || | ||| ||
Sbjct 18085 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCAC 18144
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 18145 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 18196
>seq2629
Length=50867
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| | |||||| |||||||||||| || ||||| ||||
Sbjct 38007 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 38066
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| || || || || |||||||||||| || || || || | |||
Sbjct 38067 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 38126
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| || || | | ||||||||| | ||| | || ||||| |||| || || || ||
Sbjct 38127 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 38185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433813908886348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |