Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3051 165 7e-36
seq2657 125 6e-24
seq2289 120 3e-22
seq2358 104 2e-17
>seq3051
Length=56537
Score = 165 bits (182), Expect = 7e-36
Identities = 545/837 (65%), Gaps = 23/837 (3%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| |||||||| || ||||| | || || | || ||
Sbjct 42547 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 42606
Query 57630 TCTAAGGATCTGAGCGATTGGGAT--TC-CCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| ||||| || ||| ||| | || |||||| || |||| | | || ||
Sbjct 42607 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 42666
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
|| || | || || |||||||| || || || ||||| |||||||| | |||| |
Sbjct 42667 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 42726
Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804
|| || || | || || | | || || | ||||| ||||| || ||| | |
Sbjct 42727 TT--CAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGA 42784
Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864
| || ||| | || | || | || || || |||||||| || ||| | ||||| | |
Sbjct 42785 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 42844
Query 57865 A-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923
| | || || || ||||| || ||||| || || || ||| ||||||||
Sbjct 42845 CTCAACGGACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 42903
Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980
|| ||| || | | ||||| || | | || | || || || || | || |
Sbjct 42904 GACTGGGCAGTTAGGTGGATCCAA---GATAAGGATTCTACCTTTGCTCAGCGTCTCGTT 42960
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||| || || || ||||| ||||| || ||| ||| || | || || ||| |
Sbjct 42961 GCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTC 43020
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||||| ||| | |||||||| || |||||| | || || || || |||
Sbjct 43021 AAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAG 43080
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157
|||||||| || || || || ||||| | | ||| ||| || | | |||| | |
Sbjct 43081 GGTCTCCACACCGACTTCGCCTGCCTCCTCTTCTCCCACCTT----AGACACCGCCCAAG 43136
Query 58158 C-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216
| | | | || ||| | || |||||||| ||| ||||| | ||||| | ||
Sbjct 43137 CAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGAC 43196
Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276
|| || || || || ||||||| |||||| | |||||| | ||||||||
Sbjct 43197 TGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 43256
Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAA 58336
||| || |||||||| || ||||| || | ||| | ||||| ||| ||
Sbjct 43257 GTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAA 43316
Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393
|| || ||||| ||| | ||||| || | || ||||| ||||| ||||| ||
Sbjct 43317 CCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAA 43373
>seq2657
Length=10989
Score = 125 bits (138), Expect = 6e-24
Identities = 415/640 (65%), Gaps = 9/640 (1%)
Strand=Plus/Plus
Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202
||||||| || || ||||| || ||||| || || | |||||| | ||| || || |
Sbjct 2041 TGGTGCGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGG 2100
Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262
| || | || || | || | ||||| | |||| ||||| |||||||
Sbjct 2101 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGA 2160
Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322
| || || || || ||||||||||| | | | || ||| || || ||||| ||||
Sbjct 2161 TGAAGGCGCCGCGGTCGGCGGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGG 2220
Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382
||||||| || | |||| || || || ||| |||||| ||| ||| |
Sbjct 2221 TCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCGCCGT 2280
Query 22383 -TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441
|| | ||||| || || || | ||| ||| | ||| ||| || || || |||
Sbjct 2281 CTGCG-ATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACCAGGTCCTTG 2339
Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501
| ||| |||| || ||||| |||||||||| || ||| ||||| ||| |||||
Sbjct 2340 AGCAGCCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTC 2399
Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561
|| ||| | || ||||| | || ||| || || ||||| | ||| || || || |||
Sbjct 2400 GAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGC 2459
Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCA 22619
|| || || | || || ||||| | | ||||||| ||| || | ||||||
Sbjct 2460 ATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTG--ATCTGGGCCTTGAGAG 2517
Query 22620 TCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGC 22679
|||||||||||| |||| || || || | ||||||| |||||||| | | | |
Sbjct 2518 AGTCCCAGTCCCACAGGTCGGTAGGAGTAAC---GCCCCACATGTCGTATTGGAGCTCAC 2574
Query 22680 CGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGC 22739
| | | ||| || ||||| || ||||| | || | ||| ||| || ||
Sbjct 2575 CCTTGGACACTGGGGATCCCTCGTAAGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCA 2634
Query 22740 AGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGAT 22779
| || ||| || |||| || || |||||||||||
Sbjct 2635 CGGAGGCAGTCAAAGCACCGTGGTAGATGGTCTCGAAGAT 2674
>seq2289
Length=32595
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| |||||
Sbjct 1872 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 1813
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || || ||||||||| ||| | || || ||||||
Sbjct 1812 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 1753
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| ||| | || ||| | ||| | ||| || |||
Sbjct 1752 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAAC 1693
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||||||||| |||| ||| | || | || ||||
Sbjct 1692 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGCGGTGGTA 1644
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || |||||||| || || || ||||| || | || || ||| | ||
Sbjct 1644 ATGCAGATTTTTGTCAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCT 1585
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| || || ||||||||| || | || || ||||||
Sbjct 1584 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAG 1525
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || ||||| || ||| |||| || ||| || || || |||
Sbjct 1524 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1465
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||| || ||||| || ||| |||| ||
Sbjct 1464 ATTCAAAAGGAGTCGACCCTGCATTTGGTTCT 1433
>seq2358
Length=47611
Score = 104 bits (114), Expect = 2e-17
Identities = 167/240 (70%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || ||||
Sbjct 18193 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 18134
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | |||| | ||||| | || ||||||||| || | || || |||||
Sbjct 18133 CGATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 18074
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||| ||||| ||| | || || || | ||||| ||
Sbjct 18073 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAA 18014
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427
||| || || || || || ||||| |||| || ||||| | || ||| |||||||
Sbjct 18013 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTTCGTGGAGGTGCCAAGAAGCG 17954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445749020682480
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