Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2657 116 7e-21
seq3051 95.1 2e-14
>seq2657
Length=10989
Score = 116 bits (128), Expect = 7e-21
Identities = 181/256 (71%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| |||||||||||||| ||||| || || ||| || || ||||| ||||||
Sbjct 3522 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCC 3581
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904
||||| ||||| || | | | | | | |||||| || ||||| |||| |||| |||
Sbjct 3582 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTG-GTGT 3640
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| |||||||| || || || || | |||||||| | ||
Sbjct 3641 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 3700
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || || | || || ||||||||||| || || ||||||||||||||
Sbjct 3701 TGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCAT 3760
Query 95025 GTCCTGAGGGCGCTCA 95040
|| ||| || | ||||
Sbjct 3761 GTGCTGTGGCCTCTCA 3776
>seq3051
Length=56537
Score = 95.1 bits (104), Expect = 2e-14
Identities = 158/228 (69%), Gaps = 9/228 (4%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATT------T 101904
|||||||||||||| | ||||| ||| ||||| ||| |||| |||| |
Sbjct 42888 CATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAG---ATAAGGATTCTACCTT 42944
Query 101905 GGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGC 101964
|| | | | |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct 42945 TGCTCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGC 43004
Query 101965 ATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTT 102024
|||||||||||| ||||||| | || | || |||| || |||| ||| || ||| |
Sbjct 43005 CTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCT 43064
Query 102025 CATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||| || | || || ||||| || |||||| || ||| | || ||
Sbjct 43065 CATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCCTGCCTCCTCTT 43112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989544454058645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |