Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2657 170 2e-37
seq3051 123 3e-23
>seq2657
Length=10989
Score = 170 bits (188), Expect = 2e-37
Identities = 476/722 (66%), Gaps = 14/722 (2%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|||||||| || || |||||| |||||| ||| ||||| | || ||||| | | |
Sbjct 3165 TCGAACTCATCGCCGTAAACATCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 3224
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307
|| || |||| | || || || ||||| |||||||| |||||||| ||||| ||| ||
Sbjct 3225 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGC-ATAGAA 3283
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367
| || | | | |||||| || || ||||| | | || |||||| | |
Sbjct 3284 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGGAACTCAAA 3343
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
| ||| | ||||| || || | ||| ||||| | | | ||||| || ||||| || ||
Sbjct 3344 GACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 3403
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
|| || | ||| || |||||||| || | || | | ||| || | ||| ||||| ||
Sbjct 3404 TTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGA 3463
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA---TTACTAATTGATAG 63544
| || |||||||||| || || | ||| ||||||| ||| | || | ||
Sbjct 3464 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAAT-- 3521
Query 63545 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCC 63604
|| || || || || | || ||||| | || || || | ||||||||||| ||
Sbjct 3522 -CCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACC 3580
Query 63605 TTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGT 63664
|| || ||||| || |||||| | | || ||| || | ||| | | ||
Sbjct 3581 CTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTGGGCCTGTGGTGT 3640
Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724
|| ||||| || | || || |||||||| || || |||| ||| | || |||||
Sbjct 3641 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 3700
Query 63725 CGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACA 63783
||||| || | || |||||| || | ||||| || || || |||||||| | ||
Sbjct 3701 TGTCTCGATTGTCTTCTCAATATCCTCACCG-TGAATGCCCACCGCAACACGCATAATCA 3759
Query 63784 TGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63843
||||||| || || ||| ||| ||| | | | | | ||||||| |||| |
Sbjct 3760 TGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGTCGGAGAAGGTAGGATCGCTCCAGGG 3819
Query 63844 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901
| || || || || || | ||| ||||| || || ||||| | | | | || |||||
Sbjct 3820 TCTTGAAGCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGAGGACAGCAGAGTTGAG 3877
Query 63902 CT 63903
||
Sbjct 3878 CT 3879
>seq3051
Length=56537
Score = 123 bits (136), Expect = 3e-23
Identities = 361/553 (65%), Gaps = 5/553 (1%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | || || || ||||| || || || |||||| |
Sbjct 43407 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 43348
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
|| || || || ||||||||||| || || ||||| ||||| | || | | |
Sbjct 43347 CAGGGAGATGTTCTCCATGAAATCGAATGGGTTGGTCGACTTGTAG-TACTTCTCGTTAC 43289
Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 43288 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 43229
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| || | || | ||||| ||| |||| | || ||||| || ||| || |
Sbjct 43228 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGACAG 43169
Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| | || || | | |||| | | || || | ||| | || || |
Sbjct 43168 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 43109
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
| || ||||| ||| ||| |||||||| || | || | ||||| || || |
Sbjct 43108 GGAGGCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGG 43049
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || || | ||| ||||||||||| || ||||| || ||||| ||||| || ||||| |
Sbjct 43048 TCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 42989
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGT 33753
||||||| || || || ||||| ||||||| || | || || | | | | |
Sbjct 42988 AGAAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTAT 42929
Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 42928 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGG 42869
Query 33814 CATTAAAGAGATA 33826
|||| ||||| ||
Sbjct 42868 CATTGAAGAGGTA 42856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629793044986320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |