Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq2358 89.7 5e-13
seq2289 82.4 8e-11
>seq2358
Length=47611
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||||| || ||||| || || ||||| ||||| | |||| || |||
Sbjct 17984 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 18043
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
||||| || || || ||||||| || ||||| || || || || || || ||||| |
Sbjct 18044 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18103
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| || || | | || | || |||| | ||||||||||| ||| | ||||||
Sbjct 18104 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 18163
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| |||| || || ||||| ||||||||
Sbjct 18164 CCCGTCAGGGTCTTCACGAAGATTTGCAT 18192
>seq2289
Length=32595
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| || || | || ||||| ||||||||||| || || |
Sbjct 1418 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 1477
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || || ||||| ||||||||| ||||||| || ||||| || |||||
Sbjct 1478 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1537
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || ||||| ||| | || | || | | || | || || | | |||||
Sbjct 1538 ATTCCCTCCTTGTC-CTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCAC 1596
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| || | |||||| || || | || || || || || ||||||
Sbjct 1597 CTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCATA 1645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496044659704800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |