Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3051 118 1e-21
>seq3051
Length=56537
Score = 118 bits (130), Expect = 1e-21
Identities = 362/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| ||| ||| ||||||||||| | || | ||||| || || || ||
Sbjct 43103 CAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 43044
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| | ||| ||||||||||| || ||||| || || || || || || || || ||||||
Sbjct 43043 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAG 42984
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241
|| || || || || || ||||||| || | || || | | | | || ||
Sbjct 42983 ATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGG 42924
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||| | ||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 42923 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 42864
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361
||||| || | || | || || | ||||| ||||| | || || |
Sbjct 42863 AAGAGGTATGTCCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 42804
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| | |||||||| || || || || || |||||||| || | ||| || | | |
Sbjct 42803 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATC 42744
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| || || | | || || || | || ||||| || ||||||||| || ||
Sbjct 42743 TGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCG 42684
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTG-TTAATTTATTCCAA 42538
|| || || | ||||| || || || || || | || || |||||
Sbjct 42683 AAGAAAGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAG 42624
Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598
|| | | || || || | ||| | || ||| | ||||| || |||||||| |||||
Sbjct 42623 TCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCCGCCTTC 42564
Query 42599 TTATACATATTCCAGAT 42615
|| ||||| | ||||||
Sbjct 42563 TTGTACATCTGCCAGAT 42547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671113033960440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |