Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3051 165 1e-35
seq2657 161 1e-34
seq1955 91.5 2e-13
>seq3051
Length=56537
Score = 165 bits (182), Expect = 1e-35
Identities = 372/558 (67%), Gaps = 6/558 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || || || ||||| | || ||| | |||||
Sbjct 42547 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 42606
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | ||| | | ||| |||||| | || || ||
Sbjct 42607 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAATGATGATGAGCGCTACTTCATCTCC 42666
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| || | || ||||| |||| || || ||||| |||||||| || || | ||
Sbjct 42667 CATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 42726
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||| | ||||| ||||| ||||||||||||||
Sbjct 42727 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 42786
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||| | || | ||||| || || |||| ||||| || | |
Sbjct 42787 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 42846
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
||||| | | || ||||| || || ||||| || | || | || || |||||
Sbjct 42847 CAACGGACATAC---CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 42903
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || |||||||| | || | | ||| | | || | | || || ||
Sbjct 42904 GACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCTACCTTTGCTCAGCGTCTCGTTGCC 42963
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| || || ||||| |||||||| || || || || |||| || |||||||||
Sbjct 42964 TTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAG 43023
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || ||||| | |||||| | || || || || |||||
Sbjct 43024 AAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAGGGT 43083
Query 125556 CTACACTGTGACTTTGCC 125573
|| ||| ||||| |||
Sbjct 43084 CTCCACACCGACTTCGCC 43101
>seq2657
Length=10989
Score = 161 bits (178), Expect = 1e-34
Identities = 348/515 (68%), Gaps = 4/515 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||| ||| | | ||| | || || |||||| | ||| ||| | || |
Sbjct 3475 ACCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGG 3416
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|||||| || || ||||| || || || || ||| | ||| ||||| | || || |||
Sbjct 3415 TACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGG 3356
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
|||||||| || ||||| || | || || | || ||| ||| || || | ||
Sbjct 3355 CACGCGGATGTCTTTGAGTTCCTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCCGT 3296
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||| | |||||||| ||||| |||||| | || ||| | ||||||||||| ||| | |
Sbjct 3295 GCCCGTGACTTGTTCTATGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAG 3236
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| |||||| ||| ||||||||| || | || || || | ||| | |||
Sbjct 3235 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGC 3176
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGAGT 97165
|| ||||| ||||| ||| || ||||||| | ||||| | || |||| | |
Sbjct 3175 GATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTA-T 3117
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| | || | |||| || ||| | |||| | | ||||| ||||| |||| || |
Sbjct 3116 CAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTT 3058
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| | ||||||||| || || ||||| |||||||| || | || ||||||
Sbjct 3057 TCATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCC 2998
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319
||||||| |||||||| || ||||| ||||||
Sbjct 2997 GCAGCTCCAACCTGTGCACAGAGATTGTCGAGTAC 2963
>seq1955
Length=10280
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123
||||| ||||| || || || ||||||||||||||| |||||| || ||||||| ||
Sbjct 2256 GAGGGTGATCTCGGCCCTGTCTACGGATTCCAGTGGCGGCACTTTGGGGCCAAGTACGTG 2197
Query 70124 GACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161
||| | |||| ||||| |||| ||||||||||||||
Sbjct 2196 GACGCCCAGACGGACTACACGGGACAGGGTGTTGATCA 2159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741030307954440
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