Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2289 125 2e-23 >seq2289 Length=32595 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| || ||||| | || || || || || || ||| Sbjct 1448 GTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCA 1507 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || ||||| ||||| || || ||||||||||| | || Sbjct 1508 GCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTG 1567 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | ||| ||||| || ||||| ||||| || ||||| || Sbjct 1568 ACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTC 1627 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 1628 TTGACAAAAATCTGCAT 1644 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || || || || || || || || || || ||| Sbjct 998 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAA 1057 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || || || || || || || |||||||||||||| | || || || Sbjct 1058 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTG 1117 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| || || || ||||| || ||||| ||||| || || | || || || Sbjct 1118 TCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACG 1177 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 1178 AAAATCTGCAT 1188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151352387601252