Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 96.9 3e-15
seq2358 82.4 6e-11
>seq2289
Length=32595
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576
|| ||||| || || |||||||||||||||||| || | || | || || | |||||
Sbjct 1436 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGTG-CGGCCATCCTC 1494
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||||||| | | || | |||||||| ||| || | | |||||||||
Sbjct 1495 CAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTG 1554
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
||| ||| ||||| | |||||||| | || ||| ||| | || || || ||
Sbjct 1555 AATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTT 1614
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || ||||||||||||||
Sbjct 1615 TCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCT 48575
||| || ||||| ||||||||||| || |||||||| || || | ||| | | ||||
Sbjct 979 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTCCTCCCATCCT 1037
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| |||||||| || || |||| | |||||||| ||| || | || ||||| |||
Sbjct 1038 CGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCT 1097
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| || ||||| | ||||| || | |||||| ||||| || ||||| |
Sbjct 1098 GAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCT 1157
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| ||||| | || || || |||||||||||
Sbjct 1158 TTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576
|| || ||||| || |||||| ||||||||||| || | | | || || |||||||
Sbjct 1664 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG-CGACCGTCCTC 1722
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||| || || |||| | |||||||| ||| || | | |||||||||
Sbjct 1723 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1782
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| ||| ||| | | | ||||| |||| ||||| ||| | || ||||| ||
Sbjct 1783 GATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTT 1842
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || || || || ||||||||
Sbjct 1843 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872
>seq2358
Length=47611
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| || | || | || || ||||| ||| |||||| || ||||||||||| |
Sbjct 17965 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCG- 18023
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| || || | ||||| |||||||| ||| || | || | |||||||| ||| |
Sbjct 18024 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 18083
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | | ||||||||| || || ||||| | | || ||||||| ||||||
Sbjct 18084 GAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCA 18143
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || || || || || || || || ||||| || || |||||
Sbjct 18144 CCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421235187057119
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |