Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1909 100 4e-17 seq2319 98.7 2e-16 >seq1909 Length=9086 Score = 100 bits (110), Expect = 4e-17 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| ||||| Sbjct 5708 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCTAT 5766 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 | | ||||| || ||||||||||| ||||||||| |||| Sbjct 5767 CAGACGTCTTGCGCGTCGTGGTGGTGTCAAGCGTATCTC 5805 >seq2319 Length=37332 Score = 98.7 bits (108), Expect = 2e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| |||| ||| | |||| ||||||| || || |||| ||| | Sbjct 1365 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACG 1306 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| ||||| ||| | || ||||||| | Sbjct 1305 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACTTCCCTCGACGTCGTCTACG 1246 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || ||||||||||| | | || ||||| || ||||| Sbjct 1245 CCCTCAAGCGTCAAGGCCGCACCCTGTACGGTTTCGGTGGTTAA 1202 Score = 91.5 bits (100), Expect = 2e-14 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 1522 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 1464 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 ||| ||||| || |||||||| || ||||||||| Sbjct 1463 CCGCCGTCTCGCACGTCGTGGAGGTGTCAAGCGT 1430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072348276467