Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3051 125 8e-24 >seq3051 Length=56537 Score = 125 bits (138), Expect = 8e-24 Identities = 363/558 (65%), Gaps = 3/558 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | ||| || || || || || | ||| || ||| || | Sbjct 43104 GCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 43045 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || | | || || || ||||||||||| || || || || || || || || || Sbjct 43044 GCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 42985 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || || | ||| | ||||| | | ||| Sbjct 42984 GATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTG 42925 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| | | ||||| ||||| || ||||| || ||||| | || ||||| || || Sbjct 42924 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATT 42865 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || ||||| || | || || |||||||| ||||| | || || || | Sbjct 42864 GAAGAGGTATGTCCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGT 42805 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || | || | ||||| || |||||||| |||||||| || | ||||| | ||| Sbjct 42804 CTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGAT 42745 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 ||| || || || | ||| | ||| || || ||||| || || || || || || Sbjct 42744 CTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGC 42685 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCA 93567 || ||||| | | ||| || || | ||||||||| || | | || | ||| Sbjct 42684 GAAGAAAGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCA 42625 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 ||| || || || || ||||| | || || | ||||| || |||||||| || || Sbjct 42624 GTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGATGCTTCCGCCTT 42565 Query 93628 TTTGTACATATCCCATAT 93645 |||||||| | ||| || Sbjct 42564 CTTGTACATCTGCCAGAT 42547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556839089389560