Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 179 7e-40
seq2629 120 6e-22
seq2301 93.3 8e-14
>seq2289
Length=32595
Score = 179 bits (198), Expect = 7e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | |||||||| || || ||||| || || ||||| || ||||||
Sbjct 1646 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 1705
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || || | || ||||| || |||
Sbjct 1706 AGAGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1765
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||| || ||||||||||| | || || ||
Sbjct 1766 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 1825
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| || |||||||||||||||||||| ||||||||
Sbjct 1826 TCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| |||||| ||| || |||||||| || |||
Sbjct 962 CCGCCACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1021
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||||||||| || | |||||| || ||||| || || | || ||||| |||||
Sbjct 1022 AGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1081
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||| | ||||||| || |||||||| | || || ||
Sbjct 1082 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 1141
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| ||||| || | |||||||||||| ||||||||
Sbjct 1142 TCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | |||||||| ||||| || |||||||| || || ||
Sbjct 1190 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAC 1249
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| |||||
Sbjct 1250 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1309
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||| ||||| | ||||||| |||||||| || | || || |||
Sbjct 1310 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACT 1369
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || ||||| ||||| ||||||||||| || |||||
Sbjct 1370 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416
Score = 136 bits (150), Expect = 7e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | |||||||| || || ||||| || |||||||| || ||||||
Sbjct 1874 CCACCGCGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1933
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||| |||||||| || || | ||| ||||| || |||
Sbjct 1934 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 1993
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| ||| ||| |||||||| || | || || ||
Sbjct 1994 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACC 2053
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || || ||
Sbjct 2054 TCAAGGGTGATGGTCTTGCCAGT 2076
>seq2629
Length=50867
Score = 120 bits (132), Expect = 6e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| || || || ||
Sbjct 38007 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 38066
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || ||||| || ||||||||||| ||||| | |||||| |||
Sbjct 38067 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 38126
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || || || || | ||||||||| || ||||| | ||||||||||||
Sbjct 38127 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 38185
>seq2301
Length=34292
Score = 93.3 bits (102), Expect = 8e-14
Identities = 147/209 (70%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 225432 CCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCG 225491
||| ||| ||| | || |||||||| |||||||| || || || | ||| | | | |
Sbjct 3816 CCGTGCAGACTTCATCGAGGAAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGG 3757
Query 225492 TCAGGCCCTTGAGGTG--CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGT 225549
| || ||| |||| | || |||||| |||||| || |||| ||| || ||
Sbjct 3756 TGTGGGTCTTCAGGTAATCCTG--GAGCCACTTGACGTTGGCAACATCCAAGTGATTGGT 3699
Query 225550 AGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTT 225609
||||||||||||||| || | ||||| | || | || || | | |||| |||||
Sbjct 3698 AGGTTCGTCCAGAAGGAGAACATCAGCCTTCATCAACATAGCTCTAGCAAGAGCGAGCTT 3639
Query 225610 CATTTTCCAGCCCCCGGACAGGGAGCCGA 225638
||| ||||| || |||||||| |||||||
Sbjct 3638 CATCTTCCATCCACCGGACAGCGAGCCGA 3610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921586468246680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |