Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 82.4 6e-11
>seq2289
Length=32595
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || || ||||| ||||| ||||||||| |||||||| || | || ||
Sbjct 1199 AGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGG 1258
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || || | |||||||| || || |||||||||||||| ||| || | || |||
Sbjct 1259 CCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCC 1318
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089
|| || || || ||| | | | | |||| | || ||| ||| | |||
Sbjct 1319 TTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTA 1378
Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||||| |||||||| || || || || |||||||||||
Sbjct 1379 ATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968
|| || || |||| ||| || || |||||| ||||||||||| || | || | || ||
Sbjct 1427 AGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGTG-CG 1485
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| || |||| ||||| || ||||| |||||||||||||| ||| || | | |||
Sbjct 1486 GCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTC 1545
Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088
|||||| ||| || ||| | | | | |||||| ||||| || | |||
Sbjct 1546 CTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGT 1605
Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || ||||| || || || || ||||| || |||||
Sbjct 1606 AATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397047306541438
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |