Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 125 2e-23
seq2358 109 1e-18
seq2629 100 7e-16
seq3051 93.3 1e-13
>seq2289
Length=32595
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || ||||| | ||| || || ||||| || ||||| |
Sbjct 1190 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAC 1249
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || ||||| ||||| ||||| || ||||
Sbjct 1250 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1309
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || ||||| ||||| || | || ||||| || || | ||| ||| || |||
Sbjct 1310 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACT 1369
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || ||||| ||||| |||||||||||||| || |||||
Sbjct 1370 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | ||| || | |||| || || || || || || ||||||| |
Sbjct 1646 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 1705
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || ||||| ||||| ||||| || ||
Sbjct 1706 AGAGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1765
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| ||||| || || || | ||| ||| || ||
Sbjct 1766 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 1825
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||| ||||| || || || ||||||||||| ||||||||
Sbjct 1826 TCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| |||||| || || ||||| || |||||| ||||| | || || || | ||
Sbjct 986 TGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGC 1045
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || ||||| ||||| ||||| || |||||| || || |||||||| || ||
Sbjct 1046 TTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTG 1105
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
| || ||||| || || | || || || || ||||| || || ||||| ||||||
Sbjct 1106 GACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTC 1165
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| ||||||||||| ||||||||
Sbjct 1166 AAGGTCTTGACGAAAATCTGCAT 1188
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||| | || ||||| || || || | || || || || |||
Sbjct 1454 TCCTTTTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAG 1513
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| ||||| || || ||||| || || ||||| || |||| || |||||
Sbjct 1514 ATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACGTTA 1573
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||||| || || ||||| |||||||| || || |||||||||||
Sbjct 1574 TCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACA 1633
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 1634 AAAATCTGCAT 1644
Score = 98.7 bits (108), Expect = 2e-15
Identities = 128/173 (74%), Gaps = 8/173 (5%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| ||||| || | ||| || || ||||||
Sbjct 1910 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAG 1969
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCAC 288398
|||||||| || || || ||| ||||| || || || ||||| || ||| || ||
Sbjct 1970 ATCAGACGTTGCTG---GTCCGGGGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAAC 2025
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451
||| || || | |||| ||| || || || || ||||| ||||| || ||||
Sbjct 2026 GTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 2078
>seq2358
Length=47611
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || || ||||| || || | |||| ||| || || ||||| || || || |
Sbjct 17966 CCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 18025
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || ||||||||||| ||||| || || |||
Sbjct 18026 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 18082
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || |||||||| || | || || || || |||| |||| ||| ||
Sbjct 18083 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCC 18142
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || ||||| ||||| ||||| || |||||
Sbjct 18143 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18192
>seq2629
Length=50867
Score = 100 bits (110), Expect = 7e-16
Identities = 132/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| || |||||||| || || | || || || || ||||||
Sbjct 38007 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 38066
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| ||||| || || ||| ||||| || || || ||||| |||| || || ||
Sbjct 38067 AGGCGCTGCTGG---TCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTG 38123
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| |||| || || || || || ||||| ||||| || |||| |||||||||
Sbjct 38124 TCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACG 38183
Query 288463 AA 288464
||
Sbjct 38184 AA 38185
>seq3051
Length=56537
Score = 93.3 bits (102), Expect = 1e-13
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176
|||||||| | ||| || | || ||| | || |||| ||||| ||| | | ||||
Sbjct 43184 AAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGA 43243
Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTG 269235
| ||||| || || ||||| || || | | || | | | |||||| | |||||
Sbjct 43244 AGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCC-CTCGGTAACGAGAAGTAC 43302
Query 269236 TACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAAC 269295
||||| |||| || || |||| || ||||| || || || | ||||||||| |||
Sbjct 43303 TACAAGTCGACCAACCCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAAC 43362
Query 269296 TTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340
|||||||| ||||| ||| |||||| ||| ||||||| |||
Sbjct 43363 TTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 43407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179607258429682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |