Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2301 93.3 9e-14 >seq2301 Length=34292 Score = 93.3 bits (102), Expect = 9e-14 Identities = 200/299 (67%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 333693 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 333752 |||| |||||||||| | || || || ||| |||||||||| || || |||||| Sbjct 3916 AGGGTGTAGTAACTCTTGGCCTCTGGCTTCTGCTTGACGAACTCGGCCAAGTTGCCCTTG 3857 Query 333753 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 333812 || ||||| || ||||| ||| ||| ||||| || | |||||| Sbjct 3856 TAGCAGGCGAGCTTCTTTCCGGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 3797 Query 333813 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 333872 || ||||||||||| || || |||| | | | | || | || | ||||||| || Sbjct 3796 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGGGTCTTCAGGTAATCC 3737 Query 333873 ATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGC 333932 |||||| | ||||| | ||| | || ||||| || ||||| ||||| || | Sbjct 3736 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 3677 Query 333933 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 | || |||| | ||| || | ||||||||||| ||||| ||||| || || || || Sbjct 3676 TCAGCCTTCATCAACATAGCTCTAGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 3618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102835926502650