Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2657 255 7e-63 seq3051 176 5e-39 >seq2657 Length=10989 Score = 255 bits (282), Expect = 7e-63 Identities = 1115/1741 (64%), Gaps = 51/1741 (3%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| || |||||||| || | ||||| || | Sbjct 2046 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTG 2105 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | |||||| | |||| || ||| | |||||||||||||||||| Sbjct 2106 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAG 2165 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 || || || || ||||| | | | | | | || | || ||||| || || Sbjct 2166 GCGCCGCGGTCGGCGGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 2222 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||||||| ||| || || | ||||| | |||||| ||||||||||| || | Sbjct 2223 TTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCGCCGTCT 2282 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 || ||| | | |||||| | | ||||||||||| || | || |||| | Sbjct 2283 GCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGC 2342 Query 113894 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953 || ||||| || ||||| || || ||| || | | ||||| || | Sbjct 2343 AGCCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTCGAG 2402 Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| ||||| |||||||| ||| || | ||| |||| ||||||||| ||||||||| Sbjct 2403 GTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATG 2462 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 ||||| | ||| ||| ||| |||| ||| | | | | || | ||||||| | |||| Sbjct 2463 GGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCC 2522 Query 114074 CAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 ||||| | || | || | || |||||| || | ||||| ||| | | Sbjct 2523 CAGTCCCACAGGTCGGTAGGAGTAACGCC---CCACATGTCGTATTGGAGCTCACCCTTG 2579 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAG 114187 || |||| |||||||| | |||||||||| ||| | || || |||| | ||||| Sbjct 2580 GACACTGGGGATCCCTCGTAAGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCACGGAG 2639 Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247 || | || |||| || || ||||| || || | | || | ||||||| Sbjct 2640 ---GCAGTCAAAGCACCGTGGTAGATGGTCTCGAAGATCTGGGAGTTGAGGAACTTGGCC 2696 Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307 ||| ||||| || | || ||| | ||| |||| || ||||| |||||||| Sbjct 2697 TCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCA 2756 Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAA 114364 | | ||| ||| | || | | || | || || |||| ||||| || | Sbjct 2757 ACGGCAACTGGCCTGTGACGGAAGTT---GCTGCGTTTGGCCTCCGGGACGGGGTAGTAG 2813 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 || || || | | |||| | || ||| ||||||| ||||| || |||||||| Sbjct 2814 TTGACGTCAATGATCTTATTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCTTC 2873 Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484 | | | || | ||| | | | ||||| | || ||||| | || |||| Sbjct 2874 TGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGCCAAG 2933 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544 |||||||| | |||||| ||| |||||| | ||| || || |||| || || Sbjct 2934 TTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTTGGAG 2993 Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604 || ||||| || | |||||| || || ||| ||| || ||||||||||| | | Sbjct 2994 CTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACAAC 3053 Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGC 114663 ||| | || | || ||||| || || |||| |||||| | | ||| | | || | | | Sbjct 3054 ATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCC 3113 Query 114664 TGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAA 114720 | | | ||| ||| | | ||||||| |||||| |||||| || || || Sbjct 3114 TTG-ATAGT---CTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAA 3169 Query 114721 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATT 114779 ||| || || | |||| | || || || || | ||||| | ||| | ||| | Sbjct 3170 CTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCCAGT 3228 Query 114780 GACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGAT 114839 || || ||| ||||||||||||||||| || || ||||||||||| |||| | | Sbjct 3229 CGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCATAGAACAAGT 3288 Query 114840 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 114899 | || || |||| || | || || || | ||| |||| || || | || || Sbjct 3289 CACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGGAACTCAAAGACAT 3348 Query 114900 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCT 114953 |||||||||| || || | ||| | |||| | || | | || ||| | | Sbjct 3349 CCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACC---AGGGCGCTTGTTGCCACCTT 3405 Query 114954 GGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATT 115013 ||| || ||||| || ||| || || ||||| ||||| || | || || | || | Sbjct 3406 GGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGT 3465 Query 115014 GGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAA 115073 || || || || ||| | | |||| | || | ||||| | || || | Sbjct 3466 TTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATATTCAATCCGA 3525 Query 115074 TACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGA 115133 |||| || || ||||||||| || || | |||| || | ||||| || || | Sbjct 3526 TACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAA 3585 Query 115134 TCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCA 115192 | || |||| | ||| | ||||||| ||| | || ||||| |||||||||| Sbjct 3586 TACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTG-GGCCTGTGGTGTACCA 3644 Query 115193 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGG--GACATCTTATCGTAGG 115250 || |||||||| ||||| | ||||| |||| || |||| ||||| | ||| | Sbjct 3645 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATG 3702 Query 115251 TCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATG 115309 |||| | | | | ||| || || |||||||| || | || || ||||||| |||| Sbjct 3703 TCTCGATTGTCTTC-TCAATATCCTCACCGTGAATGCCCACCGCAACACGCATAATCATG 3761 Query 115310 T 115310 | Sbjct 3762 T 3762 >seq3051 Length=56537 Score = 176 bits (194), Expect = 5e-39 Identities = 348/509 (68%), Gaps = 7/509 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||||||||| |||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 43089 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 43030 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||||||||| | || || || ||||||||||| ||||| ||| Sbjct 43029 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACAGC 42970 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 ||||| |||| |||||||| |||||||| ||| | | |||| | | || Sbjct 42969 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGGATCCACCTAACTGC 42910 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297 ||| | ||||| |||| ||| || || | ||||| ||| || | ||||| | || Sbjct 42909 CCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTCCG 42850 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 126357 || | | || |||||||| | || ||||| || ||||| ||| |||| | | Sbjct 42849 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 42790 Query 126358 TTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGG 126416 || || ||| || || ||||||| |||| ||||| ||||| ||||| | | Sbjct 42789 CTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 42732 Query 126417 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGG 126475 | || | | || ||||| |||||||| || ||| | || || || || || Sbjct 42731 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAGA 42672 Query 126476 ATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGTCGTCAAGATCC 126532 | || ||||| | | |||| || || ||| | |||||||||| ||| ||| Sbjct 42671 ACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTGAAGGTCC 42612 Query 126533 TTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 || |||||||| | |||||| || ||||| Sbjct 42611 TTGGAGAGATCAATCTCCTCTGCTGTCCA 42583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597330310676520