Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 114 1e-20
seq2358 107 2e-18
>seq2289
Length=32595
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||||| || |||||||||||| ||||| || | |||||| || | || ||
Sbjct 1436 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCC 1495
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||||||||| || || || ||||||||||| | || | | |||||||||| ||
Sbjct 1496 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCC-TG 1554
Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| | || | |||| | | | || || |||||||| || | ||| || || ||
Sbjct 1555 AATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTT 1614
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||| ||||| || |||||
Sbjct 1615 TCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Score = 113 bits (124), Expect = 5e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| || | ||||| || |||| || |||||||| || |||||
Sbjct 1681 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAA 1740
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 1741 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 1800
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| ||| || || || | |||||||| |||||||| || ||||| ||
Sbjct 1801 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1860
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 1861 GAAGATCTGCAT 1872
Score = 95.1 bits (104), Expect = 1e-14
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | ||||||||||| || || ||||| || ||| |||| | |
Sbjct 973 ACGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCC 1032
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| || ||||| || || ||||||||||| | ||| | | ||||||
Sbjct 1033 ATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTT 1092
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170
||| ||| | || | |||| ||| | | | ||||| || || || |||| ||
Sbjct 1093 ATCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTA 1150
Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || || | ||||| || || || |||||
Sbjct 1151 ATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| |||| ||| || || | || || |||||||| || |||||
Sbjct 1225 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 1284
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | ||| | || |||||| || ||| || |||| |
Sbjct 1285 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTT 1344
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | || || ||| || || || | ||| || || || || || || ||||| ||
Sbjct 1345 ATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGAC 1404
Query 42197 AAAGATTTGCAT 42208
|||||||||||
Sbjct 1405 GAAGATTTGCAT 1416
>seq2358
Length=47611
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| || || |||||||| | || || || | || ||
Sbjct 17984 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 18043
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || ||||| || || ||||||||||| | || | | |||||||||| |
Sbjct 18044 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 18103
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || |||| | | | || ||| ||| ||||| || | ||||| || |||
Sbjct 18104 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 18163
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||| || |||||||||||
Sbjct 18164 CCCGTCAGGGTCTTCACGAAGATTTGCAT 18192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543191621490960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |