Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2358 109 5e-19 seq2289 109 5e-19 seq2629 93.3 4e-14 >seq2358 Length=47611 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| || || | |||| || || || || || ||||||||||| | Sbjct 17965 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 18024 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || |||||||||||||| | || || ||||||||||| || || Sbjct 18025 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 18084 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || || || || || ||| ||| || | ||||| | ||||| Sbjct 18085 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCAC 18144 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| |||| || || ||||| |||||||| Sbjct 18145 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18192 >seq2289 Length=32595 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || | |||| ||||| || || ||||||||||| || | Sbjct 1645 ACCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 1704 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| || ||||||||||| || |||| || ||||||||||| ||||| Sbjct 1705 GAGAGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 1764 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || | || || Sbjct 1765 AATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAAC 1824 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||||||| || | || || ||||| || ||||| Sbjct 1825 CTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872 Score = 102 bits (112), Expect = 8e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||| || || || || |||||||| || | | |||||| | || Sbjct 1205 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCC 1264 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || |||| || ||||||||||| || || || || || || ||| Sbjct 1265 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 1324 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| || || | |||| ||| || || ||||| | || | | Sbjct 1325 TGGATCTTAGACTTGACGTTATCGATGGTAT--CCGACGACTCGACTTCCAGCGTAATTG 1382 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||||| | ||| || ||||| |||||||| Sbjct 1383 TCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || |||||||||||||| || | | ||||| | || || |||||||| || Sbjct 1448 GTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCA 1507 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||||||||| ||||||||||| || || || || || || ||| Sbjct 1508 GCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTG 1567 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | |||||| | ||||| || | || | ||||| || || | ||| Sbjct 1568 ACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTC 1627 Query 64427 TTTACGAAAATTTGCAT 64443 || || ||||| ||||| Sbjct 1628 TTGACAAAAATCTGCAT 1644 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || |||||| |||| ||||| ||||||||| Sbjct 1904 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCG 1963 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || | || || || |||||||| || |||||||| || || ||||| || || Sbjct 1964 GCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTT 2016 >seq2629 Length=50867 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | | ||||| | || || ||||||||||| ||| | || Sbjct 38007 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 38066 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || |||||||| || || ||||| || || ||| ||| || Sbjct 38067 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 38126 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 | ||||| || || || || | || | ||||||||| ||||| || || ||||| Sbjct 38127 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 38185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499625320098360