Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2657 336 2e-87 >seq2657 Length=10989 Score = 336 bits (372), Expect = 2e-87 Identities = 953/1440 (66%), Gaps = 42/1440 (3%) Strand=Plus/Minus Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047 |||| |||||| ||||| | |||||||| || || || ||||| | | | || Sbjct 3571 GACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAGGTATCGGATTGAATATC 3512 Query 94048 CACGACGTA--CGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCC 94105 ||| |||| ||||||| ||| | ||||| ||||||||| || | ||| |||||| Sbjct 3511 CAC--CGTATCCGTGCCACTGGTGCATACATTGCCGGTACCAACGGAAACTCGAACGGCA 3454 Query 94106 TCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGA 94165 | |||||||||||||| || ||||||||| | || | ||||| ||||| ||||| | Sbjct 3453 TTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGTACGTTGACCAAGGTGGCAACA 3394 Query 94166 GGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCA 94225 | | ||| ||||||| |||| | ||||| ||||||||||| || | ||| Sbjct 3393 AGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGCACGCGGATGTCTTTGAGTTCC 3334 Query 94226 TCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTC 94285 | ||| || | |||||||||||||| || | | ||| | ||| | ||||| |||| Sbjct 3333 TGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCCGTGCCCGTGACTTGTTCTATGCTC 3274 Query 94286 TCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTT 94345 ||||| | || || || || ||||| || |||||||| ||| || ||||| || | | Sbjct 3273 TCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACCCTCATGT 3214 Query 94346 GTCCCAATGAATGTCCCGGACTGTCCGACGTTT--GTGGATCGCGTTTTGAAGACTTGTA 94403 | ||||| ||||| || ||| || | || |||| | ||| | | || || | | || Sbjct 3213 GCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGCGAT-GAG-TTCGAGGCGCTCTA 3156 Query 94404 TGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGA 94463 | | ||||| | |||| |||| | ||| ||| | || |||||| ||| | Sbjct 3155 CGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTA 3096 Query 94464 TCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGT 94523 || | || ||| ||||| || | || | ||| |||| |||||| | Sbjct 3095 CTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTTTCATGTTGTACAAGGATGCCTG 3036 Query 94524 CAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGA 94583 |||| |||| ||||||| || ||||||| ||| ||||| || |||||||| || Sbjct 3035 CAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCGCAGCTCCAACCTGTGCACAGA 2976 Query 94584 GATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCT 94643 |||||||||||| || | || || ||| |||| ||||||||| ||| ||| | ||| Sbjct 2975 GATTGTCGAGTACTCTGCCCCAGATGAGGTTGCCGTGTGTAACTTGGCATCCCTTGCCCT 2916 Query 94644 GTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGT 94703 | | || | || || ||| | | ||| | | | ||| | || ||||| Sbjct 2915 GCCGACATATGT-TGACATGGCCA-ACGGC-------ACATACGACTTCCAGAAGCTTCA 2865 Query 94704 GAACTTCGCGGGAAGGATG--GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTAC 94761 | || | ||| || ||| |||| |||| | | | || ||| |||| |||| Sbjct 2864 CGAGGTCAC--ACAGGTTGTTGTCAAGAACTTGAATAAGATCATTGACGTCAACTACTAC 2807 Query 94762 CCCGTCCCGGAGGCGGAGAACTCA--AACCTGAAGCATCGGCCCATCGGCATCGGCGTCC 94819 |||||||||||||| ||| || ||| | || |||| | | | | || |||| Sbjct 2806 CCCGTCCCGGAGGC--CAAACGCAGCAACTTCCGTCACAGGCCAGTTGCCGTTGGTGTCC 2749 Query 94820 AGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGG 94879 ||||| | || || || | || | || || |||| ||| ||| ||| || | Sbjct 2748 AGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCCTTCGATTCTCCCGAGGC--CAA 2691 Query 94880 GTT--TGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCA 94937 ||| | || | | || ||||| | ||| || |||| || ||| ||||| | Sbjct 2690 GTTCCTCAACTCCCAGATCTTCGAGACCATCTACCACGGTGCTTTGACTGCCTCCGTGGA 2631 Query 94938 -CTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGG 94996 || | |||||| ||||| || |||| | | | ||||| || || ||| Sbjct 2630 GCTGGCCCAGAT-TCACGGC---ACATACGAGACTTACGAGGGATCCCCAGTGTCCAAGG 2575 Query 94997 GCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTC 95056 | | || | |||| | ||||| || | || | | |||| |||||||| ||| Sbjct 2574 GTGAGCTCCAATACGACATGTGGGGCGTTACTCCTACCGACCTGTGGGACTGGGACTCTC 2515 Query 95057 T--ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCC 95114 | | || | || | | | |||||||| ||| | ||||| || || |||||||| Sbjct 2514 TCAAGGCCCAGA--TCAAGCAGCACGGTGTCCGCAACTCCCTGCTCGTTGCACCCATGCC 2457 Query 95115 CACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAA 95174 ||| |||||||| | |||||||| ||| |||||||| ||||| |||| |||||| || Sbjct 2456 CACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCCTACACCTCGAA 2397 Query 95175 CGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACG 95234 | | ||| | || || || ||||| || |||| ||| ||||| || || Sbjct 2396 CATCTACTCGCGCCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCAACCCCTGGCTGCTCAA 2337 Query 95235 GGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC-GCC 95292 |||||| | || | ||||| | ||| ||||| | ||||||| | | ||| | | Sbjct 2336 GGACCTGGTCGAC-ATGGGTCTCTGGTCCGACAACATGAAGAACC-GCATCATCGCAGAC 2279 Query 95293 AACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACC 95352 ||||||| ||||||| ||||| | || || | ||||||||||| |||||||||||| Sbjct 2278 GGCGGCTCCATCCAGAATATCCCCAACATCCCCGCCGACATCAAGGCCCTCTACAAGACC 2219 Query 95353 GTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATC 95412 || ||||||||| | |||||| || || | || |||| |||||| |||||||| Sbjct 2218 GTCTGGGAGATCTCCCAGCGCACCATCGTCCAGATGGCCGCCGACCGCGGCGCCTTCATC 2159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494703911979240