Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 125 7e-24
seq2358 82.4 8e-11
>seq2289
Length=32595
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| ||||| | | | ||||||||||||||||||||||| |
Sbjct 1418 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 1477
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || ||||| | | |||| || ||||| |||||||||||
Sbjct 1478 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1537
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| | || | || | | || | ||| || | || |||||
Sbjct 1538 ATTCCCTCCTTGTC-CTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCAC 1596
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | ||| | ||| || || || ||||| || ||||||||||||||
Sbjct 1597 CTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Score = 102 bits (112), Expect = 8e-17
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| | ||| || ||||||||| || || || |
Sbjct 1679 GACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCCGCG 1738
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||||||||| || || || ||||| ||| || || | |
Sbjct 1739 AAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACA 1798
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||| ||||| | || | || || || || || || ||
Sbjct 1799 TTG-TCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTT 1857
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 1858 GACGAAGATCTGCAT 1872
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| || | | |||||||| || || || | |
Sbjct 997 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAA 1056
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
|| || ||||| |||||||| || ||||| || || || ||| | || | || | |
Sbjct 1057 AATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATC-CTGAATCTTGGACTTGACGT 1115
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||| | ||||| ||||||| || | || || || |||| || ||
Sbjct 1116 TG-TCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTG 1174
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 1175 ACGAAAATCTGCAT 1188
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/207 (70%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || || || | | | |||||||| || ||||||||||||
Sbjct 1874 CCACCGCGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1933
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| ||||| || |||| |||| ||||| || |||||||| ||
Sbjct 1934 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 1993
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| || | || | |||| ||| || | ||| |||| |||||| |
Sbjct 1994 ATTCCCTCCTTGTC-TTGGATCTTGCTCTTAACGTTG-TCGATGGTATCGGACGACTCGA 2051
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592
|||| | || | || || |||||||
Sbjct 2052 CCTCAAGGGTGATGGTCTTGCCAGTCA 2078
>seq2358
Length=47611
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||| || | || || |||||||| || || ||||
Sbjct 17999 GACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 18058
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 18059 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 18118
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
|||| | | || |||| |||||||||||| | || | || || || ||||| || ||
Sbjct 18119 TTGT-CGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 18177
Query 138600 TACAAAAATCTGCATGGCT 138618
|| || || |||||| ||
Sbjct 18178 CACGAAGATTTGCATGACT 18196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496243051969680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |