Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 113 4e-20
seq2358 93.3 4e-14
>seq2289
Length=32595
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||||| | || ||||| |||||||| ||||| || |
Sbjct 1418 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 1477
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || ||||| |||||| |||||||| || |||||
Sbjct 1478 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1537
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| || ||| ||||| | || | ||| || | || ||
Sbjct 1538 ATTCCCTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACC 1597
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| || || || ||||| || ||||||||||||||
Sbjct 1598 TCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 1644
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||| || | || ||||| || ||||| ||||| |||
Sbjct 1646 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 1705
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || ||| | |||| |||||||| || |||||
Sbjct 1706 AGAGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1765
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| ||| ||| | | |||| |||||| | ||| ||
Sbjct 1766 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 1825
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || || || || || ||||||||
Sbjct 1826 TCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1872
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | || | ||||| ||||||||| || || || ||||| || |
Sbjct 1190 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAC 1249
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| | |||| |||||||| || || ||
Sbjct 1250 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1309
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||| || ||| || ||||| | |||| ||| |||| |||||||
Sbjct 1310 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACT 1369
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || ||||| ||||| || || || || |||||
Sbjct 1370 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | ||| ||| || || || ||||| |||| || ||| | ||| ||
Sbjct 979 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 1038
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || || ||| | |||| |||||||| || || || || |||||||| |||
Sbjct 1039 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 1098
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|| || ||||| ||||| | | |||||||| | ||| || |||| || | || |
Sbjct 1099 AATCTTGGACTTGACGTTGT-CAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCT 1157
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||||| || || || |||||||||||
Sbjct 1158 TTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1188
>seq2358
Length=47611
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| || || || | || || ||||| || | || ||||| || || || ||||||||
Sbjct 17963 GCACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCC 18022
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| ||||| ||| || ||||| || || ||| |||||| |||||||| || ||
Sbjct 18023 GAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 18082
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || |||||||||||| ||| || ||||| | |||| || || | |||
Sbjct 18083 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCC 18142
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 18143 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 18196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475482261412560
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