Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2289 104 2e-17 >seq2289 Length=32595 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| ||||| || ||||| ||||| || || || Sbjct 1187 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCA 1246 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | |||| || ||||||||||| Sbjct 1247 GACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 1306 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || |||||||| || || |||| || | || | ||| || || ||||| Sbjct 1307 GGGATGCCCTCCTTATCTTGGATCTTAGACTTGA-CGTTATCGATGGTATCCGACGACTC 1365 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || |||| || || ||||| ||||| || || || |||||||| Sbjct 1366 GACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||||| | || | ||| || | || || || ||| | Sbjct 998 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAA 1057 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| || ||||||||||| || || || || ||||| ||||| || |||| || | Sbjct 1058 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 1116 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||| |||||||| || |||||||||| || || ||||| | || || || Sbjct 1117 GTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGAC 1176 Query 45329 AAAAATTTGCAT 45340 ||||| ||||| Sbjct 1177 GAAAATCTGCAT 1188 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAAT 45194 |||||| || || |||||||| || || || || ||| | | | ||| |||| Sbjct 1441 ATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCC--GACAGAGTGCGGCCATCCTCCAGC 1498 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || || | |||| || ||||||||||| ||||| || || || || ||||| Sbjct 1499 TGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATC 1558 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || |||| || | || | ||| || || || || || || || |||| ||| || || Sbjct 1559 TTCGACTTGA-CGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTTCC 1617 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || |||||||| ||||| Sbjct 1618 CGTAAGAGTCTTGACAAAAATCTGCAT 1644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451985577525240