Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 104 2e-17
>seq2289
Length=32595
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| ||||| || ||||| ||||| || || ||
Sbjct 1187 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCA 1246
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || || || ||| | |||| || |||||||||||
Sbjct 1247 GACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 1306
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || |||||||| || || |||| || | || | ||| || || |||||
Sbjct 1307 GGGATGCCCTCCTTATCTTGGATCTTAGACTTGA-CGTTATCGATGGTATCCGACGACTC 1365
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| || |||| || || ||||| ||||| || || || ||||||||
Sbjct 1366 GACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| || | || || || ||| |
Sbjct 998 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAA 1057
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|||| || ||||||||||| || || || || ||||| ||||| || |||| || |
Sbjct 1058 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 1116
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| |||||||| || |||||||||| || || ||||| | || || ||
Sbjct 1117 GTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGAC 1176
Query 45329 AAAAATTTGCAT 45340
||||| |||||
Sbjct 1177 GAAAATCTGCAT 1188
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/207 (70%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAAT 45194
|||||| || || |||||||| || || || || ||| | | | ||| ||||
Sbjct 1441 ATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCC--GACAGAGTGCGGCCATCCTCCAGC 1498
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
|| || || || | |||| || ||||||||||| ||||| || || || || |||||
Sbjct 1499 TGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATC 1558
Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313
|| |||| || | || | ||| || || || || || || || |||| ||| || ||
Sbjct 1559 TTCGACTTGA-CGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTTCC 1617
Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || |||||||| |||||
Sbjct 1618 CGTAAGAGTCTTGACAAAAATCTGCAT 1644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451985577525240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |