Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2657 248 1e-60 seq3051 168 8e-37 >seq2657 Length=10989 Score = 248 bits (274), Expect = 1e-60 Identities = 1059/1652 (64%), Gaps = 45/1652 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| || |||||||| || | ||||| || | Sbjct 2046 CGGAGGTAGTACATTCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTG 2105 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | |||||| | |||| || ||| | |||||||||||||||||| Sbjct 2106 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAG 2165 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734 || || || || ||||| | | | | | | || | || ||||| || || Sbjct 2166 GCGCCGCGGTCGGCGGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 2222 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||||||| ||| || || | ||||| | |||||| ||||| ||||| || | Sbjct 2223 TTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCGCCGTCT 2282 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA-- 115852 || ||| | | |||||| | | ||||||||||| || | || |||| | Sbjct 2283 GCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGC 2342 Query 115853 --CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 | ||| | ||||| || ||||| || || ||| || | | |||||||| Sbjct 2343 AGCCAGGGG----TTGACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTT 2398 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 | ||||| ||||| |||||||| ||| || | ||| |||| |||||||| ||||| Sbjct 2399 CGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGG 2458 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 ||||||||| | ||| ||| |||||||| ||| | | | || | ||||||| | Sbjct 2459 CATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 2518 Query 116031 GTCCCAGTCGTAGTTG-AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTT 116089 ||||||||| | | | | | | | | ||||||| || | ||||| ||| | Sbjct 2519 GTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATTGGAGCTCACCCT 2577 Query 116090 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGG 116146 |||| |||| |||||||| | ||||| |||| ||| | || || |||| | ||| Sbjct 2578 TGGACACTGGGGATCCCTCGTAAGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCCACGG 2637 Query 116147 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 116206 || || | || |||| || || ||||| || || | | || | ||||| Sbjct 2638 AG---GCAGTCAAAGCACCGTGGTAGATGGTCTCGAAGATCTGGGAGTTGAGGAACTTGG 2694 Query 116207 CCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACAC 116266 ||||| ||||| || | || ||| | ||| |||| || ||||| ||||||| Sbjct 2695 CCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGACCCTGGACAC 2754 Query 116267 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAA 116323 | | | ||| ||| | || | | || | || || |||| ||||| || Sbjct 2755 CAACGGCAACTGGCCTGTGACGGAAGTT---GCTGCGTTTGGCCTCCGGGACGGGGTAGT 2811 Query 116324 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 116383 | || || || | | |||| | || ||| ||||||| ||||| || ||||||| Sbjct 2812 AGTTGACGTCAATGATCTTATTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCT 2871 Query 116384 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 116443 | | | | || | ||| | | | ||||| | || ||||| | || |||| Sbjct 2872 TCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGCAAGGGATGCCA 2931 Query 116444 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 116503 |||||||| | |||||| ||| |||||| | ||| || || |||| || | Sbjct 2932 AGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCACAGGTTGG 2991 Query 116504 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGA 116563 | || ||||| || | |||||| || || ||| ||| || ||||||||||| | Sbjct 2992 AGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTACA 3051 Query 116564 GCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCG 116622 ||| | || | || ||||| || || |||| |||||| | | ||| | | || | | Sbjct 3052 ACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGG 3111 Query 116623 GCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCA 116679 || | | ||| ||| | | ||||||| |||||| |||||| ||||| Sbjct 3112 CCTTG-ATAGT---CTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCG 3167 Query 116680 AACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCA 116738 ||||| || || | | |||| | || || || || | || || | ||| | ||| Sbjct 3168 AACTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCCA 3226 Query 116739 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 116798 | || || ||| || |||||||||||||| || || |||||||| || |||| | Sbjct 3227 GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAGCATAGAACAA 3286 Query 116799 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 116858 || || || |||| || | || || || | ||| |||| || || | || Sbjct 3287 GTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGGAACTCAAAGAC 3346 Query 116859 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTG 116915 |||||||||||| || || | ||| | |||| | || ||| ||| | || Sbjct 3347 ATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTG 3406 Query 116916 GTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTG 116975 || || ||||| || || ||| || ||||| ||||| || | || || | || | Sbjct 3407 GTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAATGCCGTTCGAGTT 3466 Query 116976 GCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAA 117034 || || || || ||| | || | |||| | || | |||||| | || || | Sbjct 3467 TCCGTTGGTACCGGCAATGTATGCACCAG-TGGCACGGATACGGTGGATATTCAATCCGA 3525 Query 117035 TACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 117094 |||| || || ||||||||| || || | |||| || | ||||| || || | Sbjct 3526 TACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATAGATACCCTCAA 3585 Query 117095 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCA 117153 | || |||| | ||| | ||||||| ||| | || ||||| |||||||||| Sbjct 3586 TACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTG-GGCCTGTGGTGTACCA 3644 Query 117154 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 || |||||||| ||||| | ||||| |||| Sbjct 3645 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA 3676 >seq3051 Length=56537 Score = 168 bits (186), Expect = 8e-37 Identities = 349/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||||||||| |||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 43089 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 43030 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| ||| Sbjct 43029 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACAGC 42970 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCAT 127707 ||||| |||| ||||||| ||||||| || | |||| | |||| | | Sbjct 42969 AGCGAAGGCAACGAGACGCTGAGCAAAGG---TAGAATCCTTATCTTGGATCCACCTAAC 42913 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767 ||||| | ||||| |||| ||| || || | ||||| ||| || | ||||| | | Sbjct 42912 TGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGT 42853 Query 127768 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 127827 | || | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 42852 CCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAAT 42793 Query 127828 CATTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 127886 | || || ||| || || ||||||| |||| ||||| ||||| ||||| Sbjct 42792 GTTCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-G 42735 Query 127887 CGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 127945 | || || | | || ||||| |||||||| || ||| | || || || || Sbjct 42734 CTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCG 42675 Query 127946 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGTCGTCGAGA 128002 || | || ||||| | | |||| || || ||| | |||||||||| || Sbjct 42674 AGAACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTGAAGG 42615 Query 128003 TCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||| |||||||| | |||||| || ||||| Sbjct 42614 TCCTTGGAGAGATCAATCTCCTCTGCTGTCCA 42583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613483280888040