Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3051 246 3e-60 seq2289 138 1e-27 seq2358 114 1e-20 seq2629 102 8e-17 >seq3051 Length=56537 Score = 246 bits (272), Expect = 3e-60 Identities = 578/862 (67%), Gaps = 23/862 (3%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || ||| | || ||||| || || || || ||||| | Sbjct 43407 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 43348 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || ||| ||| | ||| ||||| || ||||||| | ||||||| ||| | | || Sbjct 43347 CAGGGAGATGTTCTCCATGAAATCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTACC 43288 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || || |||||||||||||| |||||||| ||||||||| ||| | | Sbjct 43287 GA---GGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 43231 Query 132768 ATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | || ||||| ||||| || | | || || || | || |||||||||| || Sbjct 43230 GTTCATGCCGAGCAG-CGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGCTGA 43172 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||| | || || ||| | | ||| || || || | || || Sbjct 43171 CAGCCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGA 43112 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | | ||| || |||||| || | ||||| || | ||| ||||| ||||| || Sbjct 43111 AGAGGAGGCAGGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGA 43052 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | |||| ||| | ||||||||| || || |||||||| || |||| |||||| ||| | Sbjct 43051 AGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 42992 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| ||||| || || ||||| || || || |||| | || || | || | Sbjct 42991 AGAAGAAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCT 42932 Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 | || | |||||| | | ||||| |||||||| | |||| ||| || || || ||| Sbjct 42931 TATCTTG-GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCG 42873 Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAA-CGC----ACGTAGGTGTCGATGA 133180 ||||| || || | || | || || ||| | | | ||| |||||||||| Sbjct 42872 ATGGCATTGAAGA---GGTATGTCCGTT--GAGCCTGCTCCTTGATGTATGTGTCGATGA 42818 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || || || | || | ||| | |||||| || |||||| || ||||| ||||| | Sbjct 42817 GGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGC 42758 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | || || | ||| || || ||| ||||||| || || |||||||| || | Sbjct 42757 GGGCTTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTC 42698 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 |||| |||||||| || || || || || |||||| | |||||| | || || | Sbjct 42697 CGTCAGACGCGGCGAAGAAAGCGAGAACATGGGAGATGAAGTAGCGCTCATCATCATTGA 42638 Query 133361 AGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417 ||| | ||||||| | ||||||||| || || | |||||| | ||||| || | Sbjct 42637 GGCGATTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAG 42578 Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439 | || || || || |||||||| Sbjct 42577 ATGCTTCCGCCTTCTTGTACAT 42556 >seq2289 Length=32595 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| |||||||| | || || ||| | || Sbjct 1872 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 1813 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| ||||| | ||||| Sbjct 1812 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 1753 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||||||||| ||||| || |||| ||||| ||| |||||||||| Sbjct 1752 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAAC 1693 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| |||| || || ||||| || ||| Sbjct 1692 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGT 1657 Score = 125 bits (138), Expect = 7e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| | || |||||| | |||| | | | | |||| | | || Sbjct 2076 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACCATCGACAACGTTAAGAGC 2017 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || | ||| ||||| |||||||||||| | ||||| || || || || | ||| ||||| Sbjct 2016 AAGA-TCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 1958 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || || || |||| ||||||||| ||||||||||||||| ||||| |||| || || Sbjct 1957 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 1898 Query 38447 TTTGGTGCTGCGT 38459 ||||| || ||| Sbjct 1897 CTTGGTCCTCCGT 1885 Score = 109 bits (120), Expect = 5e-19 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || ||||| || |||| || ||| | | Sbjct 1188 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 1129 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | || || ||||| || || | ||||| Sbjct 1128 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 1070 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||| ||||| || || | | | || || | ||||||||| Sbjct 1069 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAA 1010 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| ||||| || |||||||| ||| | | ||||||| Sbjct 1009 CATCCAGAAGGAGAGC-ACGCTTCACTTGGTGCTCCGTCTTCGTGGCGGCC 960 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || || || | || |||||| | | Sbjct 1416 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1357 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| || || ||||| || || | ||||| Sbjct 1356 GATACCATCGATAACG-TCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 1298 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||| ||||| || || | |||||||| |||||||| Sbjct 1297 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGACTACAA 1238 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | ||||| ||| | || || || Sbjct 1237 CATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCG 1202 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||||||||| | ||||| ||||| || || | || || || |||||||| Sbjct 1551 GACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAG 1492 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | ||||| || ||||||||||| |||||||| |||| ||||||||||| || Sbjct 1491 GATGGCCGCACTCTGTCGGACTACAACATTCAAAAGGAGTCGACCCTGCATTTGGTTCTC 1432 Query 38457 CGT 38459 ||| Sbjct 1431 CGT 1429 >seq2358 Length=47611 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 18192 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 18133 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || || |||| ||||| |||||||||||| | ||||| Sbjct 18132 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 18073 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | |||||||| || |||||| Sbjct 18072 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 18013 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||| ||||| | || || || ||||| ||| Sbjct 18012 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTG 17980 >seq2629 Length=50867 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || | |||||||| ||||||||| | || |||||| || |||| | | Sbjct 38185 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 38126 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| |||||||||||| | ||||| ||||| || Sbjct 38125 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTG 38066 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || || | ||||| || ||||||||||||||| ||| Sbjct 38065 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 38006 Query 38433 G 38433 | Sbjct 38005 G 38005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500153299512960