Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2198 241 2e-58
seq2330 93.3 5e-14
seq2380 86.0 8e-12
>seq2198
Length=22666
Score = 241 bits (266), Expect = 2e-58
Identities = 485/713 (68%), Gaps = 11/713 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 2240 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 2181
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | || ||||| || || |||||||| || || || || || |||
Sbjct 2180 TCCTCGATGGTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACG 2121
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || ||||| || |||||||| || || || || || || || ||
Sbjct 2120 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAAGCAATGGCAGCGGCGGTAGGCTCG 2061
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| ||| ||| || || ||||| | ||||| || || || || ||
Sbjct 2060 TTGATGATACGGAGAACGTTGAGTCCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 2001
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| ||||| || ||||| || || || |||| |||| | |||||
Sbjct 2000 TGGGAGTCGTTGAAGTAAGCTGGGACGGTGACAACGGCGTTGTTGACGGTTCCGCCGAGG 1941
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || || | || ||| ||| || | ||| || || ||||| || | |
Sbjct 1940 TAGGCCTCAGCAGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTG 1881
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGG 7874
|| | || || || || || || || || | ||| | ||| || |||| | |
Sbjct 1880 AAGTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAAAC-TGGCTTG--CCGC--CCTTGT 1826
Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934
||| | ||| | | | | ||||| ||| | ||||||| ||| | ||||| |
Sbjct 1825 CGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGCGAACTTGC 1766
Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994
||||| |||||||| || ||||| || ||||| | ||||||||||| ||||||||
Sbjct 1765 GACCGATCAGACGCTTGGCGTCAAAGACGGTGTTGGTTGGGTTCATGGCGACTTGGTTCT 1706
Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054
| || || || ||||| ||||| || | || || || || ||| |||| ||||| |
Sbjct 1705 TGGCGGCATCACCGATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGGGTTG 1649
Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114
| || || || |||||||| ||||| || || | |||||| | | ||| || ||||
Sbjct 1648 TGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGC 1589
Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATATATT 8167
|||| || || || || ||||| ||||||| |||| | | || || ||||||
Sbjct 1588 ACGAGTAGGTGGTACCCAAATCGATACCGA-TGCTGGGGCCAGTTAGTATATT 1537
>seq2330
Length=40478
Score = 93.3 bits (102), Expect = 5e-14
Identities = 135/190 (71%), Gaps = 3/190 (2%)
Strand=Plus/Minus
Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023
||||| || |||||| || | |||||||| || ||||| |||| || || || |
Sbjct 35163 GTGTTCTTTGGGTTCGCAGCAGCCTGGTTCTTGGCTGCGTCTCCGACCAGGCGCTCCTCC 35104
Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083
| | || || |||||||| |||||||| ||| | ||||||||||| | | |||
Sbjct 35103 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 35047
Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143
|| || | |||| ||| || ||||| || || || || ||||| ||||||||||||
Sbjct 35046 TCGACCTTGCCGTTCTGCATCACACCGACACAAGAGTAGGTGGTTCCCAAATCAATACCG 34987
Query 8144 ATTGCTTGAG 8153
|| || |||
Sbjct 34986 ATAACTGGAG 34977
>seq2380
Length=57959
Score = 86.0 bits (94), Expect = 8e-12
Identities = 109/148 (74%), Gaps = 4/148 (3%)
Strand=Plus/Plus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| || |||||||| || | ||| || || || || || || | | ||| ||| |||
Sbjct 31489 CTTCTCAAGACCGTATGCAAGAGCAGCGGCGGTAGGCTCGTTGACGACACGGAGAACGTT 31548
Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
|||||||||||| ||| | ||||| || || ||||| || || || ||||| |||||
Sbjct 31549 CAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTTGGCGCTGGGAGTCGTTGAAGTAA 31606
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGA 7742
|| ||||| || || || |||| | |||
Sbjct 31607 GCTGGGACAGTGACAACGGCGTTCTTGA 31634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635108037759960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |