Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2198 241 2e-58 seq2330 93.3 5e-14 seq2380 86.0 8e-12 >seq2198 Length=22666 Score = 241 bits (266), Expect = 2e-58 Identities = 485/713 (68%), Gaps = 11/713 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 2240 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 2181 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || || |||||||| || || || || || ||| Sbjct 2180 TCCTCGATGGTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACG 2121 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| || || || || || || || || Sbjct 2120 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAAGCAATGGCAGCGGCGGTAGGCTCG 2061 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| ||| ||| || || ||||| | ||||| || || || || || Sbjct 2060 TTGATGATACGGAGAACGTTGAGTCCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 2001 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| ||||| || ||||| || || || |||| |||| | ||||| Sbjct 2000 TGGGAGTCGTTGAAGTAAGCTGGGACGGTGACAACGGCGTTGTTGACGGTTCCGCCGAGG 1941 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||| ||| || | ||| || || ||||| || | | Sbjct 1940 TAGGCCTCAGCAGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTG 1881 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGG 7874 || | || || || || || || || || | ||| | ||| || |||| | | Sbjct 1880 AAGTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAAAC-TGGCTTG--CCGC--CCTTGT 1826 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 ||| | ||| | | | | ||||| ||| | ||||||| ||| | ||||| | Sbjct 1825 CGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGCGAACTTGC 1766 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 ||||| |||||||| || ||||| || ||||| | ||||||||||| |||||||| Sbjct 1765 GACCGATCAGACGCTTGGCGTCAAAGACGGTGTTGGTTGGGTTCATGGCGACTTGGTTCT 1706 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || ||||| ||||| || | || || || || ||| |||| ||||| | Sbjct 1705 TGGCGGCATCACCGATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGGGTTG 1649 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || |||||||| ||||| || || | |||||| | | ||| || |||| Sbjct 1648 TGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGC 1589 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATATATT 8167 |||| || || || || ||||| ||||||| |||| | | || || |||||| Sbjct 1588 ACGAGTAGGTGGTACCCAAATCGATACCGA-TGCTGGGGCCAGTTAGTATATT 1537 >seq2330 Length=40478 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/190 (71%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| || |||||| || | |||||||| || ||||| |||| || || || | Sbjct 35163 GTGTTCTTTGGGTTCGCAGCAGCCTGGTTCTTGGCTGCGTCTCCGACCAGGCGCTCCTCC 35104 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| |||||||| ||| | ||||||||||| | | ||| Sbjct 35103 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 35047 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || | |||| ||| || ||||| || || || || ||||| |||||||||||| Sbjct 35046 TCGACCTTGCCGTTCTGCATCACACCGACACAAGAGTAGGTGGTTCCCAAATCAATACCG 34987 Query 8144 ATTGCTTGAG 8153 || || ||| Sbjct 34986 ATAACTGGAG 34977 >seq2380 Length=57959 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| || |||||||| || | ||| || || || || || || | | ||| ||| ||| Sbjct 31489 CTTCTCAAGACCGTATGCAAGAGCAGCGGCGGTAGGCTCGTTGACGACACGGAGAACGTT 31548 Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||||||||||| ||| | ||||| || || ||||| || || || ||||| ||||| Sbjct 31549 CAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTTGGCGCTGGGAGTCGTTGAAGTAA 31606 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGA 7742 || ||||| || || || |||| | ||| Sbjct 31607 GCTGGGACAGTGACAACGGCGTTCTTGA 31634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635108037759960