Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2657 239 6e-58 seq3051 141 1e-28 >seq2657 Length=10989 Score = 239 bits (264), Expect = 6e-58 Identities = 940/1453 (65%), Gaps = 39/1453 (3%) Strand=Plus/Minus Query 111556 TCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTC-TTGATGGAAACCCCA 111614 |||||||||| ||| | |||||| | |||| ||||| ||| || | | ||| Sbjct 3825 TCAAGACCCTGGAGCGATCCTACCTTCTCCGACTTGATGGCAAGGTTGCTG-AGAGGCCA 3767 Query 111615 CAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTG 111674 ||| ||||| | ||||| || ||| | || || || || || |||||||| | Sbjct 3766 CAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGTGAGGATATTGAGAAGACAATC 3707 Query 111675 GAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAA 111733 ||||||||| || ||||| | || |||| ||||| | ||||| |||||||| Sbjct 3706 GAGACATACAACCTCATGTCTTCCAAATAC-TTCACACACGCTTCCCCAACACTCTTCAA 3648 Query 111734 CGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTC 111793 |||||||||||| |||| | || || ||| | | | | ||||||||| Sbjct 3647 TGCTGGTACACCACAGGCCCAGCTTTCGTCCTGCTTCTTGGTCGACATGAAGGAGGATAG 3588 Query 111794 AATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGG 111853 || | || || || | ||| |||| |||||| ||||||||| ||||| || Sbjct 3587 TATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAGG 3528 Query 111854 TATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATG 111912 |||||| || | ||||| | || | |||| | || | ||| ||||| || | Sbjct 3527 TATCGGATTGAATATCCACCGTATCCGTGCCA-CTGGTGCATACATTGCCGGTACCAACG 3469 Query 111913 GTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAA 111972 | | || | || ||| | || ||||| ||||| || ||| ||| || | || || Sbjct 3468 GAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGTACGTTG 3409 Query 111973 ACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 |||||| ||| ||| || || |||| |||| |||||||||||||||||| Sbjct 3408 ACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGCACGCGG 3349 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCG 112089 || || | |||||||| || ||| | ||||| || | ||||| | || ||| | Sbjct 3348 ATGTCTTTGAGTTCCTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCCGTGCCCGTG 3289 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 | | |||| |||||||||||||| ||||||||||||||| | || ||| ||| ||| Sbjct 3288 ACTTGTTCTATGCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCG 3229 Query 112150 ATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAG 112208 | ||| | ||| | || || || || || || || | | |||| || || ||| Sbjct 3228 ACTGGACCCTCATGTGCCCCAACGAATGC-CCTGGATTGGCAGATGTTTACGGCGATGAG 3170 Query 112209 TTTGAAGCCCTCTACACAAAGTACGAGGAAGA----AA--GTCGGGCGACTGCGACGGTG 112262 || || || |||||| |||||| | || || |||| |||| | || Sbjct 3169 TTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACTATCAAGG-C 3111 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 |||| || | ||| | | |||||| ||||||| || ||||| || | || | Sbjct 3110 CCAGAAGC-----TTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCCTTTC 3056 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||| | ||||| || ||||| |||| ||||| || || ||||| | ||| ||| Sbjct 3055 ATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCGC 2996 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 || |||||||| || ||||| || | || | | | | ||||||| || |||||| Sbjct 2995 AGCTCCAACCTGTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGTTGCCGTGTGT 2936 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGATT 112500 ||| | ||||| | || || || | ||||| || || | ||| | |||| || | Sbjct 2935 AACTTGGCATCCCTTGCCCTGCCGACATATGTTGA--CATGGCCAACGGCACATACGACT 2878 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || || ||||| || || | ||| || ||| | || | | ||||| Sbjct 2877 TCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTCAAGAACTTGAATAAGATCATTGACG 2818 Query 112561 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || | |||||||| ||| | || | || | | ||| | ||| ||| Sbjct 2817 TCAACTACTACCCCGTCCCGGAGGCCAAACGCA---GCAACTTCCGTCACAGGCCAGTTG 2761 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 | |||||||| ||||| || |||| |||| | | |||| | || ||||| Sbjct 2760 CCGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCCTTCGATTCTC 2701 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-G 112736 ||| || ||| |||| | | || || ||||| || || |||| ||| |||| Sbjct 2700 CCGAGGCCAAGTTCCTCAACTCCCAGATCTTCGAGACCATCTACCACGGTGCT-TTGACT 2642 Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796 || |||| |||| || || | || |||| || || | ||||| || |||| Sbjct 2641 GCCTCCGTGGAGCTGGCCCAGATTCACGGCACATACGAGACTTACGAGGGATCCCCAGTG 2582 Query 112797 TCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACT 112854 || |||||| | ||| |||| || ||||||| || | || | | | | |||| Sbjct 2581 TC-CAAGGGTGAGCTCCAATACGACATGTGGG-GCGTTACTCCTACCGACCTGTGGGACT 2524 Query 112855 GGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914 ||||| ||||||||| | |||||| || | ||| | || ||| || | | |||| Sbjct 2523 GGGACTCTCTCAAGGCCCAGATCAAGCAGCACGGTGTCCGCAACTCCCTGCTCGTTGCAC 2464 Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974 | ||||| || ||||||||| | || ||| | || || || ||||| || ||||||| Sbjct 2463 CCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCCTACA 2404 Query 112975 CGACGAACATCTA 112987 | |||||||||| Sbjct 2403 CCTCGAACATCTA 2391 >seq3051 Length=56537 Score = 141 bits (156), Expect = 1e-28 Identities = 345/513 (67%), Gaps = 15/513 (3%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873 ||||| || || ||| | |||||||| ||||| | |||| ||||| | || | ||| Sbjct 42583 TGGACAGCAGAGGAGATTGATCTCTCCAAGGACCTTCACGACTGGAACAATCGCCTCAAT 42642 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || |||| | ||||| | | || || ||||| || | ||| || |||||| Sbjct 42643 GATGATGAGCGCTACTTCATCTCCCATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATT 42702 Query 101934 GTTTTTGAGAATATCAATAACAACTTT-GCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991 || ||||| || | ||| || | ||||| || |||| | ||||| | | Sbjct 42703 GTCAACGAGAACCTCCTCGAGCGCTTCAGCAGC-GAGGTCCAGATCC-CAGAAGCCCGCT 42760 Query 101992 CTTTCTATGCGTATCAATGTCATAAT-GAAATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||| | || || | |||| || || | | || | ||||||||| ||| Sbjct 42761 GCTTCTACG-GTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTCCCTCCTC 42819 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || |||| || || ||||| ||| | || | ||||| | |||||| | || Sbjct 42820 ATCGACACATACATCAAGGAGCAGGCTCAACGGACATACCTCTTCAATGCCATCGAGACC 42879 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCG 102167 |||| || || | ||||| || || ||||| | | |||| | |||| | || Sbjct 42880 ATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTC- 42938 Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227 | |||||||| |||| ||| | || || || ||||||||||||||||||||| || Sbjct 42939 --TACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGC 42996 Query 102228 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 |||||| | | |||| |||||||||||||| || |||||| | || || |||||| Sbjct 42997 TCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCG 43056 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| ||||| ||||| |||||| Sbjct 43057 AACGAGCTCATCTCCCGTGATGAGGGTCTCCAC 43089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620718198805680