Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2657 199 5e-46 seq3051 122 1e-22 >seq2657 Length=10989 Score = 199 bits (220), Expect = 5e-46 Identities = 1044/1644 (64%), Gaps = 33/1644 (2%) Strand=Plus/Plus Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810 ||| ||||| || || |||||| |||||| || | ||||| | | |||||| || Sbjct 2207 GATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTG 2266 Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870 || || || || | || ||| | | |||||| | | |||||| ||||| || | Sbjct 2267 GATGGAGCCGCCGTCTGCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTC 2326 Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930 || || |||| || |||||| | ||||| || || ||| | | Sbjct 2327 GACCAGGTCCTTGAGCAGCCAGGGGTTGACGACTTGGAACTCGCCGGCCAGGACACGGCG 2386 Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990 | |||||||||| |||||||| || ||||| || || || | ||| || | ||| Sbjct 2387 CGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGGAGGT 2446 Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050 |||||| || ||||| ||||| | | || ||| || | ||| | | |||||| | Sbjct 2447 GGAGGCAGTGGGCATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTG 2506 Query 106051 TTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATT 106109 |||||||| |||||||| | | | | || | || ||||||| || ||| Sbjct 2507 GGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATT 2565 Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169 | ||| | || | |||| || || ||||| | ||||| || | || || | | Sbjct 2566 GGAGCTCACCCTTGGACACTGGGGATCCCTCGTAAGTCTCGTATGTGCCGTGAATCTGGG 2625 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 ||| || | || || | |||| || ||||| || ||||| | | || | Sbjct 2626 CCAGCTCCACGGAGGCAGTCAAAGCACCGTGGTAGATGGTCTCGAAGATCTGGGAGTTGA 2685 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 |||||| || ||||| || | |||| | ||| |||| || |||| Sbjct 2686 GGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAGGAATGCATCAGCAAGAC 2745 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA--GACTTTCGCGCAGTCTCA-- 106345 | || ||||| | ||| || ||||| || | || | ||| || ||| Sbjct 2746 CCTGGACACCAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGTTTGGC-----CTCCGG 2800 Query 106346 -ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 ||||| || | || |||||||| || | || ||| ||||| || ||||| Sbjct 2801 GACGGGGTAGTAGTTGACGTCAATGATCTTATTCAAGTTCTTGACAACAACCTGTGTGAC 2860 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464 || ||||| || | | || | |||| | | | ||||| | || ||||| Sbjct 2861 CTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACATATGTCGGCAGGGC 2920 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 | |||||||| || || || || |||||| | | |||||| | ||| ||||| Sbjct 2921 AAGGGATGCCAAGTTACACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGT 2980 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 |||| |||||| || || || || | ||||| ||||| ||||| |||||| || Sbjct 2981 GCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGC 3040 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||||||| | |||| | || | || ||||| ||||| |||| |||||| | | ||| Sbjct 3041 ATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCA 3100 Query 106645 CA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTA 106701 | | || | | || | || | ||| ||| | |||||| |||||| ||| Sbjct 3101 AAGCTTCTGGGCCTTGATAGTCTTGCGA---CCCTTACCCTCCTTCTCGTAGCCCTCGTA 3157 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGA 106760 ||| || || ||||| || || | || | | || || || || || || || | Sbjct 3158 GAGCGCCTCGAACTCATCGCCGTAAACATCTGCCAATCCAGG-GCATTCGTTGGGGCACA 3216 Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820 || | ||| | || || ||| || ||||||||||| || || |||||||| || | Sbjct 3217 TGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAGAGAG 3276 Query 106821 ATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879 | || | || | ||| || | || || | || ||||| | || || ||| Sbjct 3277 CATAGAACAAGTCACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAGG 3335 Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCG 106935 ||||| | || |||||||||||||||||||| |||| |||| || || | | | Sbjct 3336 AACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCACCAGGGCGCTTG 3395 Query 106936 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995 ||| | |||| | || || | || ||| ||| || ||||| ||||| || | ||| Sbjct 3396 TTGCC-ACCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAGCATAGGGACAAT 3454 Query 106996 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 107055 || | || | || || || || ||| | | |||| | | | ||||| Sbjct 3455 GCCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGAT 3514 Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 107115 | || || ||||| ||||| ||||||||| ||||| | | || || |||| Sbjct 3515 ATTCAATCCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTTGAGTGTGTCATA 3574 Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175 |||||| | || |||||||| || ||| | |||||| || | ||| || || Sbjct 3575 GATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGAAAGCTG-GGCCT 3633 Query 107176 -TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACAT 107232 ||||||||||||||||||||| ||||| | ||||| |||| || |||| ||||| Sbjct 3634 GTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACAT 3691 Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292 || ||||||||| | ||||| || || ||||| ||||| | || ||||| Sbjct 3692 GAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACCGCAACACG 3751 Query 107293 CATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTT 107352 ||||| ||||| || || | || | ||||||| || || |||| ||| Sbjct 3752 CATAATCATGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGTCGGAGAAGGTAGGATCG 3811 Query 107353 CTCAAGGGTTTTGAGACCAAAGTA 107376 ||| ||||| |||| || ||||| Sbjct 3812 CTCCAGGGTCTTGAAGCCGAAGTA 3835 >seq3051 Length=56537 Score = 122 bits (134), Expect = 1e-22 Identities = 336/509 (66%), Gaps = 7/509 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||||||||||||||| ||||| || || || || |||||| ||||| | |||||| || Sbjct 43089 GTGGAGACCCTCATCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAGCCATGAGGCC 43030 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| ||| Sbjct 43029 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACAGC 42970 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || |||| || |||| || |||| | ||| | | ||| | | ||| Sbjct 42969 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTATCTTGGATCCACCTAACTGC 42910 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 117524 ||| | |||||||||| || || || | || | |||||| | || | | || Sbjct 42909 CCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTCCG 42850 Query 117525 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 117584 || || ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 42849 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 42790 Query 117585 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCG 117643 || || || | ||| | ||||||| |||| ||||| ||||| || || | | Sbjct 42789 CTCGATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 42732 Query 117644 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 117702 | || | | || ||||| |||||||| || ||| | || ||||| || || Sbjct 42731 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAGA 42672 Query 117703 ATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCGTCAAGATCT 117759 | | ||||| | |||| ||||| ||| | |||||||||| ||| || Sbjct 42671 ACATGGGAGATGAAGTAGCGCTCATCATCATTGAGGCGATTGTTCCAGTCGTGAAGGTCC 42612 Query 117760 TTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||| | ||||| || || || ||||| Sbjct 42611 TTGGAGAGATCAATCTCCTCTGCTGTCCA 42583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589957798123560