Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2289 154 3e-32 seq2358 145 2e-29 seq2629 116 8e-21 >seq2289 Length=32595 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| |||||||| ||||| || | ||||| | ||||| || |||||| Sbjct 1442 TGCAGGGTCGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGC 1501 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| || || || ||||| |||||||| || || ||||| ||||| || Sbjct 1502 TTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTC 1561 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| |||||||| || || |||||| ||||| |||| ||||||||| || Sbjct 1562 GACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTA 1621 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || || || | ||||| Sbjct 1622 AGAGTCTTGACAAAAATCTGCAT 1644 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||| ||| || || || ||||| ||| || || |||||||| |||||||| Sbjct 985 GTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTG 1044 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || || || || ||||| || || || || || || || ||||| || Sbjct 1045 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTT 1104 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||||||||||||| || || || || |||| |||||||| || Sbjct 1105 GGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGT 1164 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 1165 CAAGGTCTTGACGAAAATCTGCAT 1188 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || || ||||| || || || ||||| || | || || | ||||| || Sbjct 1207 AACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTC 1266 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || || || ||||| || || ||||| || || ||||| Sbjct 1267 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 1326 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || ||||| ||||| || ||||| || |||| ||||| Sbjct 1327 GATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTT 1386 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||| || ||||| | |||||| Sbjct 1387 TCCGGTGAGAGTCTTGACGAAGATTTGCAT 1416 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| ||||| || ||||| ||||| |||| ||||| | || || |||||||| Sbjct 1669 GTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTG 1728 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || || || || ||||| ||||||||||| || ||||| || || || Sbjct 1729 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 1788 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || |||||||| || || || || | || | ||||| || || Sbjct 1789 CGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCCGT 1848 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 1849 GAGGGTCTTGACGAAGATCTGCAT 1872 >seq2358 Length=47611 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || | |||||| |||||||| || || || |||||||| | ||| || | Sbjct 17975 AGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGG 18034 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| ||||||||||| || |||||||| || || || ||||| || ||||| || || Sbjct 18035 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 18094 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || |||||| || || || || || || ||||| |||||||| Sbjct 18095 TTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTG 18154 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | |||||| Sbjct 18155 ATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18192 >seq2629 Length=50867 Score = 116 bits (128), Expect = 8e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| |||||| | ||||| ||||||||||| || || ||||| Sbjct 38007 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 38066 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || ||||| || || |||||||| || || |||||| || || Sbjct 38067 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 38126 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || || || || || || |||||||| | ||||| || ||||| || || ||||| Sbjct 38127 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 38185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109437262688273