Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201
6-05-27] 3,119 sequences; 31,314,325 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2289 107 1e-18
seq2358 100 2e-16
seq2629 82.4 5e-11
>seq2289
Length=32595
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || |||||||| |||||||| || | || |||| |||||||| || || |||||
Sbjct 1454 TCCTTTTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAG 1513
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| ||||||| ||||||
Sbjct 1514 ATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACGTTA 1573
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | || || || | || || || |||||||| |||||||| |||
Sbjct 1574 TCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACA 1633
Query 34971 AAGATCTGCATA 34982
|| |||||||||
Sbjct 1634 AAAATCTGCATA 1645
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| || || ||||||||||| ||||| || || | || | || ||
Sbjct 1664 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 1723
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| | || | |||||||||||
Sbjct 1724 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1783
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| || || || | ||||| || | |||||| || | || |||||
Sbjct 1784 ATCTTCGACTTCAC--AT--TGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGT 1839
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| |||||||| ||||| || ||||||||||||
Sbjct 1840 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCATA 1873
Score = 86.0 bits (94), Expect = 4e-12
Identities = 138/196 (70%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | || |||| || ||||| || || || ||
Sbjct 1226 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAA 1285
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | |||||||| || ||||| ||||||
Sbjct 1286 ATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGT-- 1343
Query 34911 GCTATCGAT--TCACCGGC--CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
||||||| | ||| | ||| || || | || || || ||||| |||||||||||
Sbjct 1344 --TATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTT 1401
Query 34967 CACAAAGATCTGCATA 34982
|| ||||| ||||||
Sbjct 1402 GACGAAGATTTGCATA 1417
>seq2358
Length=47611
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826
|||| |||||||||| ||| || ||||| ||||| || ||||||||| | || ||
Sbjct 17978 CTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCA 18037
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| || ||||| || ||||| || || || || |||||||| | || | |||||||||
Sbjct 18038 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 18097
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGT 34942
|| ||||| ||||| || | ||||| || | ||| || || | |||
Sbjct 18098 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTATCGGACGACTCCACCTCAAGGGT 18153
Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||| || |||||||| ||||| |||||
Sbjct 18154 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 18192
>seq2629
Length=50867
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Plus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| ||||| | ||| |||| || ||||| || || ||||| ||
Sbjct 38007 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 38066
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || |||||||| | || | ||||||||||| |||||| ||||| || |
Sbjct 38067 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGAC--AT--T 38122
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || || ||| || || | ||| ||||| || ||||| | ||||| ||
Sbjct 38123 GTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 38182
Query 34970 AAAG 34973
|||
Sbjct 38183 GAAG 38186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324621259763832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |